CK739714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: CHM4B_HUMAN (Charged multivesicular body protein 4b OS=Homo sapiens GN=CHMP4B PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 21 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +ID VD+ M +I +Q E ++I A+S P+G Sbjct: 60 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAEEISTAISKPVG 154
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: CHM4B_XENTR (Charged multivesicular body protein 4b OS=Xenopus tropicalis GN=chmp4b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.964e-12 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 3 Query: 21 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +I+ VD+ M +I +Q E ++I +A+S P+G Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIEKVDELMQDIADQQELAQEISDAISKPVG 152
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: CHM4B_XENLA (Charged multivesicular body protein 4b OS=Xenopus laevis GN=chmp4b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.964e-12 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 3 Query: 21 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +I+ VD+ M +I +Q E ++I +A+S P+G Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIEKVDELMQDIADQQELAQEISDAISKPVG 152
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: SNF7_ASHGO (Vacuolar-sorting protein SNF7 OS=Ashbya gossypii GN=SNF7 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12 Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 3 Query: 24 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPI 302 NK A LKRK+++E Q+ ++ + Q+ +E A ET+ A++ GAS MK + + +++ VD+TMDEI EQ E ++I EA+S P+ Sbjct: 58 NKNMAKAALKRKKVFESQLLKIDKQVDSLEQQLYSIENANLNLETMKAMKQGASAMKHIHEGLDVERVDETMDEIREQVELGEEISEAISRPL 150
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: CHMP5_XENTR (Charged multivesicular body protein 5 OS=Xenopus tropicalis GN=chmp5 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12 Identity = 36/98 (36.73%), Postives = 53/98 (54.08%), Query Frame = 3 Query: 12 SKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 SK K+ A++ LK+KR+YEQQ + L + ++ K T TVDA++ GA MK K ID ++ D++ + EN +IQEALS G Sbjct: 57 SKNMVKQKALRVLKQKRMYEQQRDNLNQQSFNMEQTNYAIQSLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYG 154
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: SNF7_DEBHA (Vacuolar-sorting protein SNF7 OS=Debaryomyces hansenii GN=SNF7 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 8.466e-12 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 24 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 NK A LKRK+ YE + ++ N + Q+ +EGA ET+ A++ GA MK + ++D V+ TMD+I EQ E +I EA+S P+G Sbjct: 56 NKALAKNALKRKKGYEANLMKIENQIDSLETQLTSIEGANLNLETMKAMKQGAQAMKQIHGEYDVDKVENTMDDIREQVELADEISEAISRPVG 149
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: CHMP5_XENLA (Charged multivesicular body protein 5 OS=Xenopus laevis GN=chmp5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.106e-11 Identity = 36/98 (36.73%), Postives = 53/98 (54.08%), Query Frame = 3 Query: 12 SKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 SK K+ A++ LK+KR+YEQQ + L + ++ K T TVDA++ GA MK K ID ++ D++ + EN +IQEALS G Sbjct: 57 SKNMVKQKALRVLKQKRMYEQQRDNLNQQSFNMEQANYTIQTLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYG 154
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: CHM4A_HUMAN (Charged multivesicular body protein 4a OS=Homo sapiens GN=CHMP4A PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 21 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 KNKRAA+Q L+RK+ +EQQ+ Q + Q +E A E + + A +MK + +ID VD+ M +I EQ E +QI +A+S P+G Sbjct: 57 KNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMG 151
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: SNF7_CRYNE (Vacuolar-sorting protein SNF7 OS=Cryptococcus neoformans GN=SNF7 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.167e-11 Identity = 30/94 (31.91%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 24 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 NKR A+ L++K+ +E +++++ +L + Q+ +E A ET+ A++ GA +K + + VD TMD+I EQ + I +A+S P+G Sbjct: 57 NKRLAMAALRQKKAHENELDRIAGTRLTLETQVNAIESANLNAETMVAMKKGADALKGIHSNLTAEGVDATMDKIREQMDLTNDISDAISNPVG 150
BLAST of CK739714 vs. ExPASy Swiss-Prot
Match: CG301_HUMAN (Protein CGI-301 OS=Homo sapiens GN=CGI-301 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.167e-11 Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 3 Query: 21 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 305 KNK AA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + + A KA +ID VD+ M +I +Q E ++I A+S P+G Sbjct: 20 KNKPAALQALKRKKRYEKQLAQIDGTLSTIEFQQQALENANTNTEVLKNMGSAAKAKKAAHDNMDIDKVDELMQDIADQQELGEEISTAISKPVG 114 The following BLAST results are available for this feature:
BLAST of CK739714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739714 ID=CK739714; Name=CK739714; organism=Citrus sinensis; type=EST; length=563bpback to top |