CK739719

Overview
NameCK739719
Unique NameCK739719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length263
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.376e-28
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL-DVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EM+E M+KVAK  DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E +L+KIC+ I
Sbjct:   16 AEQAERYEEMIEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVNTIKEYRSKIEADLSKICDGI 104          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.797e-28
Identity = 60/87 (68.97%), Postives = 75/87 (86.21%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE MKKVA  + +L+VEERNL+SV YKN+IGARRASWRI+SSIEQKEE++GN +    IKEYR+++EDEL+ IC+D+
Sbjct:   15 AEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDV 101          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.797e-28
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK +DVE L+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE+KGNE +V  IK+YR ++E EL+KIC+ I
Sbjct:   14 AEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGI 102          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.065e-28
Identity = 63/88 (71.59%), Postives = 74/88 (84.09%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV-AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            A +AERY EMVE M+KV A LD ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IK+YR ++E+EL  ICN I
Sbjct:   15 AARAERYEEMVEFMEKVVAALDTELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGI 102          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.003e-28
Identity = 62/89 (69.66%), Postives = 76/89 (85.39%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KV+      ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE++V  I+EYR ++E+EL+KIC+ I
Sbjct:   18 AEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGI 106          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.228e-28
Identity = 64/89 (71.91%), Postives = 73/89 (82.02%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE  V  IK+YR ++E EL KIC+ I
Sbjct:   19 AEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGI 107          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.828e-28
Identity = 64/89 (71.91%), Postives = 73/89 (82.02%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E EL+KIC+ I
Sbjct:   19 AEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGI 107          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.828e-28
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ I
Sbjct:   18 AEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGI 106          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.828e-28
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ I
Sbjct:   18 AEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGI 106          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.917e-28
Identity = 64/89 (71.91%), Postives = 73/89 (82.02%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE  V  IK+YR ++E EL KIC+ I
Sbjct:   19 AEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGI 107          
The following BLAST results are available for this feature:
BLAST of CK739719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
14334_SOLLC1.376e-2873.0314-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
RAD25_SCHPO1.797e-2868.97DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
14333_ARATH1.797e-2874.1614-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14332_SOLTU3.065e-2871.5914-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
1433C_TOBAC4.003e-2869.6614-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14332_ORYSJ5.228e-2871.9114-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14335_ORYSJ6.828e-2871.9114-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14332_MAIZE6.828e-2871.9114-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14331_MAIZE6.828e-2871.9114-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
1433B_HORVU8.917e-2871.9114-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6108 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739719 ID=CK739719; Name=CK739719; organism=Citrus sinensis; type=EST; length=263bp
GCTGAGCAAGCCGAGAGATACCACGAGATGGTTGAAGCCATGAAGAAAGT
TGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTG
TTGGGTACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTG
TCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAA
GAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCT
GTAATGATATATT
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