CK739719

Overview
NameCK739719
Unique NameCK739719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length263
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.388e-27
Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKE+++GN  +V  IK+YR ++E EL+KIC+ I
Sbjct:   17 AEQAERYEEMVEFMEKVAKTVETEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEDSRGNSDHVSIIKDYRGKIETELSKICDGI 105          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.780e-27
Identity = 61/89 (68.54%), Postives = 74/89 (83.15%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV--AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KV  A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+++V  I++YR ++E EL+ ICN I
Sbjct:   18 AEQAERYEEMVEFMEKVTAAVESEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDEHVSVIRDYRSKIETELSNICNGI 106          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 5.780e-27
Identity = 61/89 (68.54%), Postives = 74/89 (83.15%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+ IC+ I
Sbjct:   20 AEQAERYEEMVEFMEKVAKAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGI 108          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.859e-27
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKVAK---LDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMV  M+KV+       ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +VK I+EYR ++E EL+ IC+ I
Sbjct:   13 AEQAERYEEMVSFMEKVSTSLGTSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVKCIQEYRSKIESELSNICDGI 102          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.288e-26
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV--AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            A++AERY EMVE M+KV  A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IK+YR ++E+EL  ICN I
Sbjct:   15 ADEAERYEEMVEFMEKVVAALNGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGI 103          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433F_TOBAC (14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.682e-26
Identity = 61/90 (67.78%), Postives = 71/90 (78.89%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV---AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMV+ M+KV   A    ELT+EERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IK YR ++E EL  ICN I
Sbjct:   15 AEQAERYEEMVDFMEKVVTAADGGEELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTSIKTYRSKIESELTSICNGI 104          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.196e-26
Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV-AKLDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KV A  D E LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  I++YR ++E EL+ IC+ I
Sbjct:   18 AEQAERYEEMVEFMEKVSANADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGI 106          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.869e-26
Identity = 60/89 (67.42%), Postives = 72/89 (80.90%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV--AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KV  A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+ IC  I
Sbjct:   18 AEQAERYEEMVEFMEKVCAAADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSTIRDYRSKIETELSNICGGI 106          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.869e-26
Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV---AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KV   A    ELT+EERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  I++YR ++E EL+ IC+ I
Sbjct:   18 AEQAERYEEMVEFMEKVVAAADGGEELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEGHVSTIRDYRSKIESELSSICDGI 107          
BLAST of CK739719 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.869e-26
Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 1
Query:    1 AEQAERYHEMVEAMKKV-AKLDV-ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDI 261
            AEQAERY EMVE M+KV A +D  ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I+EYR ++E EL+ IC+ I
Sbjct:   15 AEQAERYEEMVEFMEKVSAAVDGDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGI 103          
The following BLAST results are available for this feature:
BLAST of CK739719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
14335_ARATH3.388e-2769.6614-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
1433A_VICFA5.780e-2768.5414-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
14331_ARATH5.780e-2768.5414-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
1433B_TOBAC9.859e-2767.7814-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
14335_SOLLC1.288e-2668.5414-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
1433F_TOBAC1.682e-2667.7814-3-3-like protein F OS=Nicotiana tabacum PE=2 SV... [more]
1433_PEA2.196e-2669.6614-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433_OENEH2.869e-2667.4214-3-3-like protein OS=Oenothera elata subsp. hook... [more]
1433_HELAN2.869e-2666.6714-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
14332_ARATH2.869e-2669.6614-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6108 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739719 ID=CK739719; Name=CK739719; organism=Citrus sinensis; type=EST; length=263bp
GCTGAGCAAGCCGAGAGATACCACGAGATGGTTGAAGCCATGAAGAAAGT
TGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTG
TTGGGTACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTG
TCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAA
GAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCT
GTAATGATATATT
back to top