CK739723

Overview
NameCK739723
Unique NameCK739723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.312e-23
Identity = 66/166 (39.76%), Postives = 89/166 (53.61%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFLDXXXXXXXXXXXXXFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTASGEEIHPEESEDDGSKLDDSNTDWSALEGVSRVNTLLTLP 498
            ++SY R+T+KDEF+VLATDG+WDVLSN EVV IV            LVESA RAWR ++PTSK+DDCAVVCLFLD               M   +T+   V+ G               S T++ ++G       S D  + +     D SA++ V+++ TL  LP
Sbjct:  364 EVSYHRITEKDEFVVLATDGVWDVLSNTEVVSIVNRATSRASAARLLVESAHRAWRARFPTSKIDDCAVVCLFLDTDELSETSS-----SMARDMTNAVEVSSG-------------QHSNTIQLSTG------VSSDVVTAVLTDGDDLSAVDAVAKLVTLTDLP 505          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C38_ORYSJ (Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22
Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFLD 225
            D+SY R+T+KDEF+VLATDG+WDVLSN EVV IV            +VESA RAWR ++PTSK+DDCAVVCLFL+
Sbjct:  359 DVSYHRITEKDEFVVLATDGVWDVLSNSEVVSIVSQAKSEASAARFVVESAQRAWRTRFPTSKIDDCAVVCLFLN 433          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C12_ORYSJ (Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.305e-18
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFL 222
            +++ RR+T  D F+VLATDG+WDVLSNEEVV IV            +VE+AV+ WR K+PTS+VDDC+ VCLFL
Sbjct:  283 EVTSRRVTGADLFMVLATDGVWDVLSNEEVVSIVCATPRKQHASKAVVEAAVQRWRAKFPTSRVDDCSAVCLFL 356          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C65_ARATH (Probable protein phosphatase 2C 65 OS=Arabidopsis thaliana GN=At5g01700 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.618e-17
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFLD 225
            D+  R+++ +DEF+VLATDGIWDVLSNEEVV++V            LV+ A R WR K+P SK DDCAVV L+L+
Sbjct:  264 DVFCRKVSREDEFVVLATDGIWDVLSNEEVVKVVGSCKDRSVAAEMLVQRAARTWRTKFPASKADDCAVVVLYLN 338          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C48_ORYSJ (Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.106e-16
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLF 219
            ++++RR+T +D F++LATDG+WDV+SNEE V+IV            LVE AVRAWRRK     VDDC+ +CLF
Sbjct:  275 EVTHRRITAQDHFVILATDGVWDVVSNEEAVQIVASAPEREKAAKRLVEFAVRAWRRKRRGIAVDDCSAICLF 347          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLF 219
            +++YR++TDKD+F++LATDG+WDV++N E VEIV            LVE AV  WRRK  +  +DD +V+CLF
Sbjct:  275 EVTYRKITDKDQFLILATDGMWDVMTNNEAVEIVRGVKERRKSAKRLVERAVTLWRRKRRSIAMDDISVLCLF 347          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C73_ARATH (Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.659e-14
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFL 222
            +++ R ++ KD FI+LA+DGIWDV+SN+E +EIV            LVE AVRAW++K     +DD +VVCLFL
Sbjct:  281 EVTQRHISTKDHFIILASDGIWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMSVVCLFL 354          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C72_ARATH (Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana GN=At5g26010 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13
Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLV-ESAVRAWRRKYPTSKVDDCAVVCLFL 222
            +IS  R+T KD+F+VLATDG+WD+LSN+EVV ++            +V E+A  AW+++   +KVDD  V+CLFL
Sbjct:  250 EISQHRITSKDQFLVLATDGVWDMLSNDEVVSLIWSSGKKQASAAKMVAEAAEAAWKKRLKYTKVDDITVICLFL 324          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C61_ARATH (Probable protein phosphatase 2C 61 OS=Arabidopsis thaliana GN=At4g32950 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1
Query:    4 ISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFLD 225
            +S  ++T  D+F++LA+DG+WDVLSNEEV  +V            + E+A  AW +K+PT K+DD +VVCL L+
Sbjct:  244 VSTHQITSSDQFLLLASDGVWDVLSNEEVATVVMKSASEAGAANEVAEAATNAWIQKFPTVKIDDISVVCLSLN 317          
BLAST of CK739723 vs. ExPASy Swiss-Prot
Match: P2C34_ARATH (Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.537e-12
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 1
Query:    1 DISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLF 219
            +++ R ++ +D+FI+LATDG+WDV+SN+E ++IV            LV+ AVRAW RK     +DD + VCLF
Sbjct:  276 EVTQRHISIRDQFIILATDGVWDVISNQEAIDIVSSTAERAKAAKRLVQQAVRAWNRKRRGIAMDDISAVCLF 348          
The following BLAST results are available for this feature:
BLAST of CK739723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2C14_ORYSJ4.312e-2339.76Probable protein phosphatase 2C 14 OS=Oryza sativa... [more]
P2C38_ORYSJ2.795e-2264.00Probable protein phosphatase 2C 38 OS=Oryza sativa... [more]
P2C12_ORYSJ9.305e-1856.76Probable protein phosphatase 2C 12 OS=Oryza sativa... [more]
P2C65_ARATH4.618e-1754.67Probable protein phosphatase 2C 65 OS=Arabidopsis ... [more]
P2C48_ORYSJ5.106e-1652.05Probable protein phosphatase 2C 48 OS=Oryza sativa... [more]
P2C41_ARATH5.645e-1549.32Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]
P2C73_ARATH3.659e-1448.65Probable protein phosphatase 2C 73 OS=Arabidopsis ... [more]
P2C72_ARATH3.098e-1346.67Probable protein phosphatase 2C 72 OS=Arabidopsis ... [more]
P2C61_ARATH3.098e-1344.59Probable protein phosphatase 2C 61 OS=Arabidopsis ... [more]
P2C34_ARATH1.537e-1243.84Probable protein phosphatase 2C 34 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6112 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739723 ID=CK739723; Name=CK739723; organism=Citrus sinensis; type=EST; length=607bp
GATATATCCTATAGACGCCTCACTGATAAAGATGAGTTCATTGTCTTGGC
CACAGATGGGATTTGGGATGTTCTCTCAAACGAAGAAGTGGTAGAAATTG
TAGCTTCAGCACCAGCACGTTCCTCAGCGGCTCGATCACTTGTTGAGTCT
GCTGTTCGAGCCTGGAGACGCAAGTATCCAACTTCCAAAGTTGATGATTG
TGCTGTGGTATGCCTGTTCCTTGACTCAAACTCAAACACAAATGGCATAT
CTACATCTTCGACGTTCAAGATGAAAGAGCAGCTAACTTCAGTGGAGGGA
GTCAATATTGGCACTGAGAAAGGCGATGATCCATCAGGCCCAGCCAGCCT
GCCCCGGTCAGGAACTGTCCGAACCGCTAGTGGTGAAGAAATACACCCTG
AAGAAAGTGAAGATGATGGTTCGAAGCTGGACGATTCAAATACAGATTGG
TCCGCTCTTGAAGGAGTGTCTCGTGTTAATACTCTCTTGACGCTGCCTAG
GTTCACACCTGGAAAAGATGATAAGAAGGCTGCTGGCGCTCGGAAATGAC
AAGGCGATTTGGTTAGTCCATGATTTTCATAATAATAATTTTTTTTCTTG
GTCGTAT
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