CK739728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739728 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 43/129 (33.33%), Postives = 59/129 (45.74%), Query Frame = 1 Query: 166 PPKKSWIPAVKGGGNLINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI--------FVGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 492 P + W+ G + P +L G PGDYG+D GL DP K YRE E+IH RWA+ +GI + G + WF+AGA P I + + L Q++LMG +E R Sbjct: 42 PDRAKWL----GPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR 166
BLAST of CK739728 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 1 Query: 220 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF---VGQAWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 492 P +L+G PGDYG+D GL DP R E+IHGRWAM +G V Q W G+ WF+AG+ +P + S ++LG Q+LLMG VE R Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFR 177
BLAST of CK739728 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 41/111 (36.94%), Postives = 53/111 (47.75%), Query Frame = 1 Query: 220 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI--------FVGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 492 PE+L G PGDYG+D GL DP YRE ELIH RWA+ +GI + G + WF+AGA + I S + L Q++LMG E+ R Sbjct: 51 PEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR 161
BLAST of CK739728 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 39/110 (35.45%), Postives = 51/110 (46.36%), Query Frame = 1 Query: 220 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 492 P +L G PGDYG+D GL DP K YRE ELIH RWAM +G G + WF+AGA +P + + + Q++LMG +E R Sbjct: 54 PAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR 163 The following BLAST results are available for this feature:
BLAST of CK739728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739728 ID=CK739728; Name=CK739728; organism=Citrus sinensis; type=EST; length=595bpback to top |