CK739740

Overview
NameCK739740
Unique NameCK739740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:264..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 3.655e-51
Identity = 78/138 (56.52%), Postives = 90/138 (65.22%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*A--------CKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRILSSIEQKE+A+G  +  +      +G R          C ++   I  H     PS T+GESTVFYYKMKGDYYRYLAEFK  DD+KE +D SLK          +ELP THPIRLGLALNFSVFYYEI+NS
Sbjct:   60 RASWRILSSIEQKEDARGNEQNVKR----IQGYRQKVESELTDICNNIMTVIDEH---LIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNS 190

HSP 2 Score: 92.0485 bits (227), Expect = 3.655e-51
Identity = 42/50 (84.00%), Postives = 47/50 (94.00%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPE 539
            PERAC LAKQ FDEAI+ELDSLNE++YKD TLI+QLLRDNLTLWTSD+PE
Sbjct:  191 PERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPE 240
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.177e-50
Identity = 75/141 (53.19%), Postives = 87/141 (61.70%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKGMN-----------KCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRILSSIEQKEE+KG +           + E++           C D+   I  H     PSS + ESTVF+YKMKGDYYRYLAEF    +RKEAAD SL+          + L PTHP+RLGLALNFSVFYYEILNS
Sbjct:   58 RASWRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAK-------VCNDILSVIDKH---LIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNS 188

HSP 2 Score: 93.5893 bits (231), Expect = 5.177e-50
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPE 539
            PE AC LAKQAFD+AIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL E
Sbjct:  189 PESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNE 238
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.312e-49
Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG----MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI++SIEQKEE KG    +   +   G   +  R  C D+   +  H     P +TSGES VFYYKMKGDY+RYLAEF    DRK+AA++SL           ++LPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   57 RASWRIITSIEQKEENKGAEEKLEMIKTYRGQVEKELRDICSDILNVLEKH---LIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNS 187

HSP 2 Score: 87.4261 bits (215), Expect = 4.312e-49
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL 533
            P+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:  188 PDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 235
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.620e-49
Identity = 74/141 (52.48%), Postives = 89/141 (63.12%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG-----------MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI+SSIEQKEE++G             K E +     +G     K L  ++V       PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   64 RASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDG---ILKLLDSHLV-------PSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNS 194

HSP 2 Score: 92.0485 bits (227), Expect = 5.620e-49
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPE 539
            P+RAC LAKQAFDEAI+ELDSL+EESYKDSTLIMQLLRDNLTLWTSD+ E
Sbjct:  195 PDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDISE 244
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.325e-49
Identity = 74/141 (52.48%), Postives = 89/141 (63.12%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG-----------MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI+SSIEQKEE++G             K E +     +G     K L  ++V       PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   64 RASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDG---ILKLLDSHLV-------PSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNS 194

HSP 2 Score: 91.6633 bits (226), Expect = 7.325e-49
Identity = 43/50 (86.00%), Postives = 49/50 (98.00%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPE 539
            P+RAC+LAKQAFDEAI+ELD+L+EESYKDSTLIMQLLRDNLTLWTSD+ E
Sbjct:  195 PDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISE 244
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.551e-49
Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG----MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI+SSIEQKEE KG    +    E   +     +  C D+   +  H     P++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   57 RASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKH---LIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNS 187

HSP 2 Score: 87.4261 bits (215), Expect = 9.551e-49
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL 533
            P+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:  188 PDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 235
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.551e-49
Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG----MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI+SSIEQKEE KG    +    E   +     +  C D+   +  H     P++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   57 RASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKH---LIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNS 187

HSP 2 Score: 87.4261 bits (215), Expect = 9.551e-49
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL 533
            P+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:  188 PDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 235
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.551e-49
Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG----MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI+SSIEQKEE KG    +    E   +     +  C D+   +  H     P++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   57 RASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKH---LIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNS 187

HSP 2 Score: 87.4261 bits (215), Expect = 9.551e-49
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL 533
            P+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:  188 PDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 235
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.551e-49
Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG----MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI+SSIEQKEE KG    +    E   +     +  C D+   +  H     P++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   57 RASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKH---LIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNS 187

HSP 2 Score: 87.4261 bits (215), Expect = 9.551e-49
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL 533
            P+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:  188 PDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 235
[Close]
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433E_CHICK (14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.551e-49
Identity = 74/134 (55.22%), Postives = 88/134 (65.67%), Query Frame = 1 
Query:    1 RASWRILSSIEQKEEAKG----MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            RASWRI+SSIEQKEE KG    +    E   +     +  C D+   +  H     P++ +GES VFYYKMKGDY+RYLAEF   +DRKEAA++SL           +ELPPTHPIRLGLALNFSVFYYEILNS
Sbjct:   57 RASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKH---LIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNS 187

HSP 2 Score: 87.4261 bits (215), Expect = 9.551e-49
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 3 
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL 533
            P+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+
Sbjct:  188 PDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 235
The following BLAST results are available for this feature:
BLAST of CK739740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14338_SOLLC3.655e-5156.5214-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14310_ARATH5.177e-5053.1914-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]
1433E_DROME4.312e-4955.2214-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
1433B_HORVU5.620e-4952.4814-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14335_ORYSJ7.325e-4952.4814-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
1433E_SHEEP9.551e-4955.2214-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1... [more]
1433E_RAT9.551e-4955.2214-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh... [more]
1433E_MOUSE9.551e-4955.2214-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE... [more]
1433E_HUMAN9.551e-4955.2214-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE... [more]
1433E_CHICK9.551e-4955.2214-3-3 protein epsilon OS=Gallus gallus GN=YWHAE P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6129 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739740 ID=CK739740; Name=CK739740; organism=Citrus sinensis; type=EST; length=539bp
AGAGCATCATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAA
GGGTATGAACAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAA
GATGAGCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACA
CCTAATCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGAT
GAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATC
GTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCT
GCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGC
TCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCCCTGAGAGGGC
TTGCCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGATA
GCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGCAGCTTCTT
CGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAG
back to top