CK739740 | Citrus Genome Database

Overview


Name	CK739740
Unique Name	CK739740
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	539

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig1582	contig	Csv1_Contig1582:264..806.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.725e-41
Identity = 64/140 (45.71%), Postives = 82/140 (58.57%), Query Frame = 1

Query:    1 RASWRILSSIEQKEEAKG-----------MNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILN 387
            RA+WRI+SSIEQKEE +             +K E +           C  +   +  +     PS+++ ES VFY KMKGDY+RYLAEFK  D+RK A + ++           ++LPPTHPIRLGLALNFSVFYYEILN
Sbjct:   62 RAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQ-------VCATILSLLDSN---LVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILN 191

HSP 2 Score: 83.5741 bits (205), Expect = 3.725e-41
Identity = 39/49 (79.59%), Postives = 46/49 (93.88%), Query Frame = 3

Query:  393 ERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPE 539
            ++AC +AKQAF+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  194 DKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQD 242

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433_XENLA (14-3-3-like protein (Fragment) OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.330e-41
Identity = 64/136 (47.06%), Postives = 77/136 (56.62%), Query Frame = 1

Query:    1 RASWRILSSIEQKEEA--KGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK E   K      E         +  CKD    L  ++V       P++T  ES VFY KMKGDYYRYL+E    D ++E    S +          SE+ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   47 RSSWRVISSIEQKTEGNDKRQQMAREYREKVETELQDICKDVLDLLDRFLV-------PNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNS 175

HSP 2 Score: 86.2705 bits (212), Expect = 6.330e-41
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC LAK AFDEAI ELD+LNEESYKDSTLIMQLLRDNLTLWTS+
Sbjct:  176 PEKACSLAKSAFDEAIRELDTLNEESYKDSTLIMQLLRDNLTLWTSE 222

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 14332_CAEEL (14-3-3-like protein 2 OS=Caenorhabditis elegans GN=ftt-2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.239e-41
Identity = 60/136 (44.12%), Postives = 77/136 (56.62%), Query Frame = 1

Query:    1 RASWRILSSIEQKEEA--KGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK E   K     +E      +  R  C+D    L  +++       P + + ES VFY KMKGDYYRYLAE    DDR    + S +           ++ PTHPIRLGLALNFSVF+YEILN+
Sbjct:   58 RSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLI-------PKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNA 186

HSP 2 Score: 88.5817 bits (218), Expect = 8.239e-41
Identity = 41/47 (87.23%), Postives = 46/47 (97.87%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            P++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  187 PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 233

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.399e-40
Identity = 64/137 (46.72%), Postives = 79/137 (57.66%), Query Frame = 1

Query:    1 RASWRILSSIEQKEEA---KGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK E    K     E    I AE  +  CKD    L  Y++ +       +T  ES VFY KMKGDYYRYL+E    D +K   ++S +           ++ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   56 RSSWRVISSIEQKTEGNEKKQQMAREYREKIEAEL-QDICKDVLALLDNYLIAN-------ATQAESKVFYLKMKGDYYRYLSEVASGDSKKTTVENSQQAYQEAFDISKKDMQPTHPIRLGLALNFSVFYYEILNS 184

HSP 2 Score: 86.2705 bits (212), Expect = 1.399e-40
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTS+
Sbjct:  185 PEQACSLAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSE 231

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433Z_DROME (14-3-3 protein zeta OS=Drosophila melanogaster GN=14-3-3zeta PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.823e-40
Identity = 62/136 (45.59%), Postives = 75/136 (55.15%), Query Frame = 1

Query:    1 RASWRILSSIEQKEEAKGMNK--CEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK EA    +    E      +  R  C +    L  Y++       P +++ ES VFY KMKGDYYRYLAE    D R    D S             ++ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   59 RSSWRVISSIEQKTEASARKQQLAREYRERVEKELREICYEVLGLLDKYLI-------PKASNPESKVFYLKMKGDYYRYLAEVATGDARNTVVDDSQTAYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNS 187

HSP 2 Score: 88.5817 bits (218), Expect = 1.823e-40
Identity = 41/47 (87.23%), Postives = 46/47 (97.87%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            P++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  188 PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 234

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.823e-40
Identity = 60/132 (45.45%), Postives = 76/132 (57.58%), Query Frame = 1

Query:    1 RASWRILSSIEQKEEA--KGMNKCEED*GI*AEG*R*ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK E   +     +E      +  R  C D+   +  H     P +++ ES VFY KMKGDYYRYLAE    + R    + S K          +++ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   58 RSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKH---LIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 186

HSP 2 Score: 88.5817 bits (218), Expect = 1.823e-40
Identity = 41/47 (87.23%), Postives = 46/47 (97.87%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            P++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  187 PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 233

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.823e-40
Identity = 63/137 (45.99%), Postives = 79/137 (57.66%), Query Frame = 1

Query:    1 RASWRILSSIEQKEEA---KGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK E    K     E    I AE  +  C D    L  Y++       P+++  ES VFY KMKGDYYRYL+E    D ++   ++S K           E+ PTHPIRLGLALNFSVFYYEILN+
Sbjct:   56 RSSWRVISSIEQKTEGNEKKQQMAREYREKIEAEL-QEICNDVLGLLEKYLI-------PNASQAESKVFYLKMKGDYYRYLSEVASGDSKRTTVENSQKAYQDAFEISKKEMQPTHPIRLGLALNFSVFYYEILNT 184

HSP 2 Score: 86.2705 bits (212), Expect = 1.823e-40
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTS+
Sbjct:  185 PEQACSLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSE 231

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433B_PONAB (14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.375e-40
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 1

Query:    1 RASWRILSSIEQK----EEAKGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK    E+ + M K E    I AE  +  C D    L  Y++       P++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   58 RSSWRVISSIEQKTERNEKKQQMGK-EYREKIEAEL-QDICNDVLELLDKYLI-------PNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNS 186

HSP 2 Score: 87.8113 bits (216), Expect = 2.375e-40
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+
Sbjct:  187 PEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE 233

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 2.375e-40
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 1

Query:    1 RASWRILSSIEQK----EEAKGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK    E+ + M K E    I AE  +  C D    L  Y++       P++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   58 RSSWRVISSIEQKTERNEKKQQMGK-EYREKIEAEL-QDICNDVLELLDKYLI-------PNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNS 186

HSP 2 Score: 87.8113 bits (216), Expect = 2.375e-40
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+
Sbjct:  187 PEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE 233

[Close]

BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 2.375e-40
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 1

Query:    1 RASWRILSSIEQK----EEAKGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK    E+ + M K E    I AE  +  C D    L  Y++       P++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   58 RSSWRVISSIEQKTERNEKKQQMGK-EYREKIEAEL-QDICNDVLELLDKYLI-------PNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNS 186

HSP 2 Score: 87.8113 bits (216), Expect = 2.375e-40
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 3

Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+
Sbjct:  187 PEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE 233

The following BLAST results are available for this feature:

BLAST of CK739740 vs. ExPASy Swiss-Prot

BLAST of CK739740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433B_SOYBN	3.725e-41	45.71	14-3-3-like protein B (Fragment) OS=Glycine max GN...	[more]
1433_XENLA	6.330e-41	47.06	14-3-3-like protein (Fragment) OS=Xenopus laevis P...	[more]
14332_CAEEL	8.239e-41	44.12	14-3-3-like protein 2 OS=Caenorhabditis elegans GN...	[more]
143B1_ONCMY	1.399e-40	46.72	14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss...	[more]
1433Z_DROME	1.823e-40	45.59	14-3-3 protein zeta OS=Drosophila melanogaster GN=...	[more]
1433Z_BOMMO	1.823e-40	45.45	14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P...	[more]
143B1_DANRE	1.823e-40	45.99	14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha...	[more]
1433B_PONAB	2.375e-40	46.38	14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB...	[more]
1433B_MACFA	2.375e-40	46.38	14-3-3 protein beta/alpha OS=Macaca fascicularis G...	[more]
1433B_HUMAN	2.375e-40	46.38	14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_6129 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59B04 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK739740 ID=CK739740; Name=CK739740; organism=Citrus sinensis; type=EST; length=539bp
AGAGCATCATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAA
GGGTATGAACAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAA
GATGAGCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACA
CCTAATCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGAT
GAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATC
GTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCT
GCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGC
TCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCCCTGAGAGGGC
TTGCCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGATA
GCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGCAGCTTCTT
CGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAG