CK739740

Overview
NameCK739740
Unique NameCK739740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:264..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 2.375e-40
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 1
Query:    1 RASWRILSSIEQK----EEAKGMNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK    E+ + M K E    I AE  +  C D    L  Y++       P++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   58 RSSWRVISSIEQKTERNEKKQQMGK-EYREKIEAEL-QDICNDVLQLLDKYLI-------PNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNS 186          

HSP 2 Score: 87.8113 bits (216), Expect = 2.375e-40
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+
Sbjct:  187 PEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE 233          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-40
Identity = 62/145 (42.76%), Postives = 75/145 (51.72%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKG-----------MNKCEED*GI*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK  A G             K E++ G         C+D    L  Y++      N S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+
Sbjct:   57 RSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELGA-------VCQDVLSLLDNYLI-----KNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNA 189          

HSP 2 Score: 90.1225 bits (222), Expect = 2.375e-40
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  190 PEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 5.247e-40
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*ACKDL**YIVCH**TPN------PSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILN 387
            RASWRI+SS+EQKE +K   +  ++  + AE  +   ++L    +CH           P ++  ES VFYYKMKGDYYRY++EF G + +K+AAD + +             P THPIRLGLALN+SVF+YEILN
Sbjct:   69 RASWRIISSVEQKELSK---QHMQNKALAAEYRQKVEEEL--NKICHDILQLLTDKLIPKTSDSESKVFYYKMKGDYYRYISEFSGEEGKKQAADQAQESYQKATETAEGHSPATHPIRLGLALNYSVFFYEILN 198          

HSP 2 Score: 81.2629 bits (199), Expect = 5.247e-40
Identity = 36/48 (75.00%), Postives = 45/48 (93.75%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL 533
            P++AC +AK+AFD+AI E D+++E+SYKDSTLIMQLLRDNLTLWTSDL
Sbjct:  200 PQQACEMAKRAFDDAITEFDNVSEDSYKDSTLIMQLLRDNLTLWTSDL 247          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.257e-40
Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*ACKD-L**YI--VCH**TPN--PSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILN 387
            RASWRI++S+EQKE+AKG +K  E      +G R   +D L  Y   V      N  P++++ ES VFY KM+GDYYRY AEF   + R+E AD SL           ++L PTHPIRLGLALNFSVFYYEI+N
Sbjct:   54 RASWRIITSLEQKEQAKGNDKHVEI----IKGYRAKIEDELAKYCDDVLKVIKENLLPNASTSESKVFYKKMEGDYYRYYAEFTVDEKRQEVADKSLAAYTEATEISNADLAPTHPIRLGLALNFSVFYYEIMN 183          

HSP 2 Score: 77.7962 bits (190), Expect = 5.257e-40
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 3
Query:  393 ERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            ++AC LAKQAFD++IA+LD + E SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  186 DKACQLAKQAFDDSIAKLDEVPESSYKDSTLIMQLLRDNLTLWTSD 231          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.848e-40
Identity = 67/137 (48.91%), Postives = 83/137 (60.58%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*--------ACKDL**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILN 387
            RASWRI+SS+EQKE+AKG +K  E      +G R          C D+   I  +     P +++ ES VF+ KM+GDYYRY AEF   + RKE AD SL           +EL PTHPIRLGLALNFSVFY+EI+N
Sbjct:   57 RASWRIISSLEQKEQAKGNDKHVEI----IKGYRAKIEKELSTCCDDVLKVIQEN---LLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMN 186          

HSP 2 Score: 77.0258 bits (188), Expect = 6.848e-40
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 3
Query:  393 ERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            ++AC LAKQAFD+AIA+LD + E  YKDSTLIMQLLRDNLTLWTSD
Sbjct:  189 DKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRDNLTLWTSD 234          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.918e-40
Identity = 62/138 (44.93%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*----ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK  A G  K  E      E         C+D    L  Y++      N S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+
Sbjct:   57 RSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLI-----KNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNA 189          

HSP 2 Score: 90.1225 bits (222), Expect = 8.918e-40
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  190 PEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433G_PONAB (14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 8.918e-40
Identity = 62/138 (44.93%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*----ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK  A G  K  E      E         C+D    L  Y++      N S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+
Sbjct:   57 RSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLI-----KNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNA 189          

HSP 2 Score: 90.1225 bits (222), Expect = 8.918e-40
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  190 PEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433G_MOUSE (14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.918e-40
Identity = 62/138 (44.93%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*----ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK  A G  K  E      E         C+D    L  Y++      N S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+
Sbjct:   57 RSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLI-----KNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNA 189          

HSP 2 Score: 90.1225 bits (222), Expect = 8.918e-40
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  190 PEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.918e-40
Identity = 62/138 (44.93%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*GI*AEG*R*----ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK  A G  K  E      E         C+D    L  Y++      N S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+
Sbjct:   57 RSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLI-----KNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNA 189          

HSP 2 Score: 90.1225 bits (222), Expect = 8.918e-40
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:  190 PEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CK739740 vs. ExPASy Swiss-Prot
Match: 1433B_CHICK (14-3-3 protein beta/alpha OS=Gallus gallus GN=YWHAB PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 8.920e-40
Identity = 63/140 (45.00%), Postives = 81/140 (57.86%), Query Frame = 1
Query:    1 RASWRILSSIEQKEEAKGMNKCEED*G------I*AEG*R*ACKD----L**YIVCH**TPNPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNS 390
            R+SWR++SSIEQK E    N+ ++  G      I AE  +  C D    L  Y++ +       +T  ES VFY KMKGDYYRYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNS
Sbjct:   56 RSSWRVISSIEQKTER---NEKKQQMGREYREKIEAEL-QDICNDVLELLDKYLIVN-------ATQPESKVFYLKMKGDYYRYLSEVASGDNKQTTVANSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNS 184          

HSP 2 Score: 88.5817 bits (218), Expect = 8.920e-40
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 3
Query:  390 PERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 530
            PE+AC+LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+
Sbjct:  185 PEKACNLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE 231          
The following BLAST results are available for this feature:
BLAST of CK739740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_BOVIN2.375e-4046.3814-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
1433G_CHICK2.375e-4042.7614-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]
1433_NEOCA5.247e-4045.1914-3-3 protein homolog OS=Neospora caninum PE=2 SV... [more]
14333_ENTHI5.257e-4050.7514-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]
14331_ENTHI6.848e-4048.9114-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
1433G_RAT8.918e-4044.9314-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]
1433G_PONAB8.918e-4044.9314-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2... [more]
1433G_MOUSE8.918e-4044.9314-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1... [more]
1433G_HUMAN8.918e-4044.9314-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1... [more]
1433B_CHICK8.920e-4045.0014-3-3 protein beta/alpha OS=Gallus gallus GN=YWHA... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6129 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739740 ID=CK739740; Name=CK739740; organism=Citrus sinensis; type=EST; length=539bp
AGAGCATCATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAA
GGGTATGAACAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAA
GATGAGCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACA
CCTAATCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGAT
GAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATC
GTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCT
GCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGC
TCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCCCTGAGAGGGC
TTGCCACCTGGCTAAACAAGCATTTGATGAGGCGATTGCTGAACTTGATA
GCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGCAGCTTCTT
CGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAG
back to top