CK739745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A4_WHEAT (Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 9.471e-22 Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADED 259 GNAARDNKKTRIVPRHIQLAVRNDEEL+KLLG TIA+GGVMPNIH LLPKK +S D+D Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKASSSKVSTVDDD 133
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.471e-22 Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 256 GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLGDVTIA GGV+PNIH LLPKK+G G KA+ E Sbjct: 67 GNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSG-KGDKASQE 129
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2AX_PICAB (Histone H2AX OS=Picea abies PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.237e-21 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG 229 GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH +LLPKK+G Sbjct: 71 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSG 125
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A_BOTFB (Histone H2A OS=Botryotinia fuckeliana (strain B05.10) GN=hta1 PE=3 SV=4) HSP 1 Score: 101.293 bits (251), Expect = 1.616e-21 Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG-TSGSKAADED 259 GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT T+G K A ++ Sbjct: 70 GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKTAGGKPASQE 135
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.616e-21 Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG 229 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLP K G Sbjct: 75 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.616e-21 Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG 229 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLP K G Sbjct: 75 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVG 129
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A_PARAN (Histone H2A, gonadal OS=Parechinus angulosus PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 2.756e-21 Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSK 244 GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKTG+ SK Sbjct: 67 GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGSKSSK 126
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A_NEOFI (Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.756e-21 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 256 GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT SG + E Sbjct: 69 GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKGPSQE 132
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A_ASPOR (Histone H2A OS=Aspergillus oryzae GN=hta1 PE=3 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 2.756e-21 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 256 GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT SG + E Sbjct: 69 GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKGPSQE 132
BLAST of CK739745 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 2.756e-21 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 2 Query: 65 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 256 GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT SG + E Sbjct: 69 GNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKGPSQE 132 The following BLAST results are available for this feature:
BLAST of CK739745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739745 ID=CK739745; Name=CK739745; organism=Citrus sinensis; type=EST; length=359bpback to top |