CK739750

Overview
NameCK739750
Unique NameCK739750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.132e-20
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  132 REPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT-HPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 359
            R+ RV V+   +   ++DG +WRKYGQK  KGNP PR+YY+CT  PGCPVRK V+R   D+  +ITTYEG HNH +P
Sbjct:  219 RKARVSVRARCETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLP 295          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.132e-20
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 3
Query:   42 DDFDEDEPEAKRWKIEGESEGISAPGSRTVRE-PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVP----------AARGSGSRA 386
            DD +E++ E ++ K +   +       +T ++ P+V   T S++  LDDGY+WRKYGQK VK +P PR+YY+CT   C V+K VER+  D  +VITTYEG+H H  P           + GS SRA
Sbjct:   71 DDEEEEDGEEQQHKTKKRFKFTKMSRKQTKKKVPKVSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCTTTWCDVKKRVERSFSDPSSVITTYEGQHTHPRPLLIMPKEGSSPSNGSASRA 196          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.046e-19
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  141 RVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 353
            RV  +T S ID++DDG++WRKYG+K VK N N R+YYKC+  GC V+K VER   D   VITTYEG HNH+
Sbjct:   97 RVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNHE 167          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.046e-19
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  132 REPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHP-GCPVRKHVERASHDLRAVITTYEGKHNHDVP 359
            R+ RV V+  SD   ++DG +WRKYGQK+ KGNP PR+YY+CT   GCPVRK V+R + D   + TTYEG HNH +P
Sbjct:  223 RKARVSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLP 299          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.366e-19
Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = 3
Query:  105 ISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNH 350
            + +   + ++ PR   +T SD DILDDGYRWRKYGQK VK +  PRSYY+CT   C V+K V+R S +   V TTYEG HNH
Sbjct:    5 VDSSRDKKMKNPRFSFRTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIVETTYEGIHNH 86          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.043e-19
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 3
Query:  129 VREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT-HPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 359
            V++ RV V++  +   ++DG +WRKYGQK+ KGNP PR+YY+CT    CPVRK V+R S D+  +I+TYEG HNH +P
Sbjct:  174 VKKTRVSVRSRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLP 251          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19
Identity = 50/106 (47.17%), Postives = 59/106 (55.66%), Query Frame = 3
Query:   48 FDEDEPEAKRWKIEGESEGI----SAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNH 350
            F+ D  E    KI G   G      +  +R  R  RV   +    DI  D Y WRKYGQK +KG+P+PR YYKC T  GCP RKHVERA  D   +I TYEG+H H
Sbjct:  195 FEHDHSEGFSGKISGSGNGKCHCKKSRKNRMKRTVRVPAVSAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRH 300          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.854e-19
Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 3
Query:  123 RTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTH-PGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGS 380
            R +R P +  + +   D+  D Y WRKYGQK +KG+P+PR YYKC+   GCP RKHVERA+ D   +I TYEG HNH + AA  +G+
Sbjct:  224 RIIRVPAISAKMS---DVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNHSLSAADLAGA 307          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.365e-18
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 3
Query:   51 DEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPR 242
            DEDEPE KR   E +   ++    RTVREPRV+ QTTS++D LDDGYRWRKYGQKVVKGNP PR
Sbjct:  598 DEDEPEPKRRITEVQVSELADASDRTVREPRVIFQTTSEVDNLDDGYRWRKYGQKVVKGNPYPR 661          

HSP 2 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  177 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGS 380
            ++DGY W+KYGQK VKG+  P SYYKCT+ GCP ++ VER S D +     Y+ +HNH+ P     GS
Sbjct:  467 VNDGYNWQKYGQKKVKGSKFPLSYYKCTYLGCPSKRKVER-SLDGQVAEIVYKDRHNHEPPNQGKDGS 533          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 3
Query:  123 RTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPA 362
            RTVR P +  +     DI  D Y WRKYGQK +KG+P+PR YYKC T  GCP RKHVERA  D   +I TYEG+H H+  A
Sbjct:  230 RTVRVPAISAKIA---DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRHNQSA 307          
The following BLAST results are available for this feature:
BLAST of CK739750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRKY9_ARATH6.132e-2055.84Probable WRKY transcription factor 9 OS=Arabidopsi... [more]
WRK68_ARATH6.132e-2042.06Probable WRKY transcription factor 68 OS=Arabidops... [more]
WRK51_ARATH1.046e-1959.15Probable WRKY transcription factor 51 OS=Arabidops... [more]
WRK47_ARATH1.046e-1955.84Probable WRKY transcription factor 47 OS=Arabidops... [more]
WRK43_ARATH1.366e-1953.66Probable WRKY transcription factor 43 OS=Arabidops... [more]
WRK61_ARATH3.043e-1952.56Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK17_ARATH5.191e-1947.17Probable WRKY transcription factor 17 OS=Arabidops... [more]
WRK15_ARATH8.854e-1950.57Probable WRKY transcription factor 15 OS=Arabidops... [more]
WRK19_ARATH3.365e-1867.19Probable WRKY transcription factor 19 OS=Arabidops... [more]
WRK11_ARATH4.394e-1855.56Probable WRKY transcription factor 11 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6139 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739750 ID=CK739750; Name=CK739750; organism=Citrus sinensis; type=EST; length=553bp
CACAGAAGAGTAAATCAGGAGGAGGAGGAGCTGGAGGAGGAGATGATTTT
GATGAAGATGAACCTGAGGCCAAAAGATGGAAAATTGAGGGTGAAAGTGA
AGGCATTTCAGCTCCTGGAAGTAGAACAGTGAGAGAACCAAGAGTTGTTG
TTCAAACCACCAGTGACATTGACATTCTAGATGATGGGTACAGATGGAGG
AAATATGGCCAAAAAGTTGTAAAGGGGAATCCAAATCCAAGGAGTTATTA
CAAGTGTACGCATCCAGGTTGTCCAGTGAGAAAGCATGTTGAGAGAGCAT
CACACGATCTTAGAGCAGTGATCACAACCTATGAGGGAAAGCACAACCAT
GATGTTCCGGCAGCTCGCGGCAGCGGCAGCAGGGCTCTGCCGGATAATAG
CAGCAATAATAACCATAACAGTAACAGCAATAGTAACAACAACGGGACAC
TGCCCGTAAGGGCATCGGCAGTGGCTCATCATCCTAACAACAACTCGATT
CTCAATCCTGTTCACAATCTGAGGGTATCCTCATCTGAAGGCCAAGCACC
CTA
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