CK739750

Overview
NameCK739750
Unique NameCK739750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.728e-14
Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 3
Query:  183 DGYRWRKYGQKVVKGNPNPRSYYKCT-HPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAA 365
            DGY+WRKYGQK+ + NP+PR+Y++C+  P C V+K V+R++ D   ++ TYEG HNH  P A
Sbjct:  147 DGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNHTGPHA 208          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.728e-14
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3
Query:  129 VREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT-HPGCPVRKHVER-ASHDLRAVITTYEGKHNHDVP 359
            +++ RV V+ + +   ++DG +WRKYGQK  K NP PR+YY+C+    CPVRK V+R    +  A +TTYEG H+H +P
Sbjct:  186 LKKTRVCVKASCEDPSINDGCQWRKYGQKTAKTNPLPRAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPLP 264          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.257e-14
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  120 SRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            S+  ++ RVV Q   + ++L D + WRKYGQK +KG+P PRSYY+C +  GC  RK VER   +      TY  +HNH++P  R S
Sbjct:  115 SKKNQQKRVVEQVKEE-NLLSDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPQNPEKFTITYTNEHNHELPTRRNS 199          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.495e-13
Identity = 40/92 (43.48%), Postives = 48/92 (52.17%), Query Frame = 3
Query:  117 GSRTVREPRVVVQTTSDIDIL-----DDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            GS T R  R  +Q      +       D + WRKYGQK +KG+P PR YY+C T  GC  RK VER   D +  I TY  +HNH  P  R S
Sbjct:  102 GSNTSRSKRRKIQHKKVCHVAAEALNSDVWAWRKYGQKPIKGSPYPRGYYRCSTSKGCLARKQVERNRSDPKMFIVTYTAEHNHPAPTHRNS 193          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.559e-13
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 3
Query:  183 DGYRWRKYGQKVVKGNPNPRSYYKCTH-PGCPVRKHVERASHDLRAVITTYEGKHNHDVP 359
            D + WRKYGQK +KG+P PR YY+C+   GCP RK VER+  D   ++ TY  +HNH  P
Sbjct:   75 DSWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTSEHNHPWP 134          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.559e-13
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 3
Query:  123 RTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            R  ++ R +   T + ++  D + WRKYGQK +KG+P PR+YY+C +  GC  RK VER++ D    I TY G+H H  P  R S
Sbjct:  147 RKNQQKRTICHVTQE-NLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRPTHRNS 230          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana GN=WRKY69 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.112e-12
Identity = 41/103 (39.81%), Postives = 55/103 (53.40%), Query Frame = 3
Query:   93 ESEGISAPGSRTVR--EPRVVVQTTSDIDIL---------DDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAA 365
            E   IS P  +  R  E RVV    +D++            D + WRKYGQK +KG+P PR YY+C +  GCP RK VER+  D   ++ TY   HNH  P++
Sbjct:   30 EDSKISKPTPKKRRNVEKRVVSVPIADVEGSKSRGEVYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSKLMITYACDHNHPFPSS 132          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.603e-12
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 3
Query:  138 PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            P  +   +S   +  D + WRKYGQK +KG+P PR YY+C +  GC  RK VER+  D   ++ TY  +HNH  P  R +
Sbjct:  201 PAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNA 280          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.146e-12
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 3
Query:  138 PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            P  +   +S   +  D + WRKYGQK +KG+P PR YY+C +  GC  RK VER+  D   ++ TY  +HNH  P  R +
Sbjct:  203 PAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNA 282          
BLAST of CK739750 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 3
Query:  183 DGYRWRKYGQKVVKGNPNPRSYYKC-THPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGS 374
            D + WRKYGQK +K +P PRSYY+C +  GC  RK VER+  D    + TY  +HNH  P  R +
Sbjct: 1181 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNHPFPTLRNT 1245          
The following BLAST results are available for this feature:
BLAST of CK739750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK60_ARATH1.728e-1451.61Probable WRKY transcription factor 60 OS=Arabidops... [more]
WRK36_ARATH1.728e-1445.57Probable WRKY transcription factor 36 OS=Arabidops... [more]
WRK29_ARATH2.257e-1444.19Probable WRKY transcription factor 29 OS=Arabidops... [more]
WRK22_ARATH2.495e-1343.48WRKY transcription factor 22 OS=Arabidopsis thalia... [more]
WRK65_ARATH5.559e-1351.67Probable WRKY transcription factor 65 OS=Arabidops... [more]
WRK27_ARATH5.559e-1342.35Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK69_ARATH2.112e-1239.81Probable WRKY transcription factor 69 OS=Arabidops... [more]
WRK35_ARATH3.603e-1241.25Probable WRKY transcription factor 35 OS=Arabidops... [more]
WRK14_ARATH6.146e-1241.25Probable WRKY transcription factor 14 OS=Arabidops... [more]
WRK16_ARATH5.203e-1147.69Probable WRKY transcription factor 16 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6139 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739750 ID=CK739750; Name=CK739750; organism=Citrus sinensis; type=EST; length=553bp
CACAGAAGAGTAAATCAGGAGGAGGAGGAGCTGGAGGAGGAGATGATTTT
GATGAAGATGAACCTGAGGCCAAAAGATGGAAAATTGAGGGTGAAAGTGA
AGGCATTTCAGCTCCTGGAAGTAGAACAGTGAGAGAACCAAGAGTTGTTG
TTCAAACCACCAGTGACATTGACATTCTAGATGATGGGTACAGATGGAGG
AAATATGGCCAAAAAGTTGTAAAGGGGAATCCAAATCCAAGGAGTTATTA
CAAGTGTACGCATCCAGGTTGTCCAGTGAGAAAGCATGTTGAGAGAGCAT
CACACGATCTTAGAGCAGTGATCACAACCTATGAGGGAAAGCACAACCAT
GATGTTCCGGCAGCTCGCGGCAGCGGCAGCAGGGCTCTGCCGGATAATAG
CAGCAATAATAACCATAACAGTAACAGCAATAGTAACAACAACGGGACAC
TGCCCGTAAGGGCATCGGCAGTGGCTCATCATCCTAACAACAACTCGATT
CTCAATCCTGTTCACAATCTGAGGGTATCCTCATCTGAAGGCCAAGCACC
CTA
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