CK739758

Overview
NameCK739758
Unique NameCK739758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length550
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: ROCO6_DICDI (Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum GN=roco6 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.755e-19
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 2
Query:   17 VIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK--GALSPSTAV--NFALDIARGMAYLHNEPNVIIHRDLKPRNVLL-VNSSADHLKVGDFGLS 343
            +  +FR E++++  L+H N+V  LG      P  ++ EY+  GDLHK+L       L+ + A+    ALDIA+GM +LH+    ++HRDLK  NVLL +       KVGDFGLS
Sbjct: 1395 IFSEFRREIHVMSDLKHSNVVNLLGFTLS--PFTMVMEYIDCGDLHKFLHSPIGDQLNGNWALILKLALDIAKGMEFLHSVTPPLLHRDLKSPNVLLSMKDGVYTAKVGDFGLS 1506          

HSP 2 Score: 36.965 bits (84), Expect = 4.755e-19
Identity = 14/42 (33.33%), Postives = 27/42 (64.29%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANY 522
            G+  ++APE+ +  +Y  K DV++F +IL+E+L  + P   +
Sbjct: 1524 GNITWVAPEILREEEYTVKSDVYAFGLILHELLTRKHPYREF 1565          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: LIMK2_CHICK (LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.862e-19
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 2
Query:   29 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI 352
            F  EV ++  L HPN+++F+G + + K L L+TEY+ GG L  +L+          V+FA  IA GMAYLH+    IIHRDL   N L+       + V DFGLS+LI
Sbjct:  373 FLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRNADPFPWQQKVSFAKGIASGMAYLHS--MCIIHRDLNSHNCLIKLDKT--VVVADFGLSRLI 476          

HSP 2 Score: 35.8094 bits (81), Expect = 4.862e-19
Identity = 14/33 (42.42%), Postives = 24/33 (72.73%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML 495
            G+  +MAPE+   + YD+ VD+FSF ++L E++
Sbjct:  508 GNPYWMAPEMLNGQSYDETVDIFSFGIVLCEII 540          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: LIMK2_HUMAN (LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.862e-19
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   29 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI 352
            F  EV ++  L HPN+++F+G + + K L L+TEY+ GG L  +L+          V FA  IA GMAYLH+    IIHRDL   N L+       + V DFGLS+LI
Sbjct:  373 FLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMAYLHS--MCIIHRDLNSHNCLIKLDKT--VVVADFGLSRLI 476          

HSP 2 Score: 36.1946 bits (82), Expect = 4.862e-19
Identity = 14/33 (42.42%), Postives = 24/33 (72.73%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML 495
            G+  +MAPE+   + YD+ VD+FSF ++L E++
Sbjct:  508 GNPYWMAPEMLNGKSYDETVDIFSFGIVLCEII 540          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: LIMK2_RAT (LIM domain kinase 2 OS=Rattus norvegicus GN=Limk2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.862e-19
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   29 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI 352
            F  EV ++  L HPN+++F+G + + K L L+TEY+ GG L  +L+          V FA  IA GMAYLH+    IIHRDL   N L+       + V DFGLS+LI
Sbjct:  373 FLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRNVDPFPWQQKVRFAKGIASGMAYLHS--MCIIHRDLNSHNCLIKLDKT--VVVADFGLSRLI 476          

HSP 2 Score: 36.5798 bits (83), Expect = 4.862e-19
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML 495
            G+  +MAPE+   + YD+ VDVFSF ++L E++
Sbjct:  508 GNPYWMAPEMLNGKSYDETVDVFSFGIVLCEII 540          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: LIMK2_BOVIN (LIM domain kinase 2 OS=Bos taurus GN=LIMK2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.862e-19
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   29 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI 352
            F  EV ++  L HPN+++F+G + + K L L+TEY+ GG L  +L+          V FA  IA GMAYLH+    IIHRDL   N L+       + V DFGLS+LI
Sbjct:  373 FLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRNVDPFPWQQKVRFAKGIASGMAYLHS--MCIIHRDLNSHNCLIKLDKT--VVVADFGLSRLI 476          

HSP 2 Score: 36.5798 bits (83), Expect = 4.862e-19
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML 495
            G+  +MAPE+   + YD+ VDVFSF ++L E++
Sbjct:  508 GNPYWMAPEMLNGKSYDETVDVFSFGIVLCEII 540          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: KDC2_DROME (Protein kinase DC2 OS=Drosophila melanogaster GN=Pka-C3 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 4.871e-19
Identity = 39/112 (34.82%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   20 IQDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIK 355
            I+  ++E N+L ++RHP ++    +  +   L +I +Y+ GG+L  YL+  G  +  T+  +A +I   + YLH+    I++RDLKP N LL+N    HLK+ DFG +K ++
Sbjct:  316 IEHVKNERNILREIRHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGKFTSQTSNFYAAEIVSALEYLHSLQ--IVYRDLKPEN-LLINRDG-HLKITDFGFAKKLR 423          

HSP 2 Score: 42.3578 bits (98), Expect = 4.871e-19
Identity = 16/45 (35.56%), Postives = 31/45 (68.89%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY 531
            G+  Y+APE+ + + ++K VD ++  +++YEML G PP  + +P+
Sbjct:  431 GTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFYDEQPF 475          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: IPL1_ASHGO (Spindle assembly checkpoint kinase OS=Ashbya gossypii GN=IPL1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.919e-19
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 2
Query:   23 QDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS 343
            + FR EV +   LRHPN+ Q  G   + K + L+ EYL  G+L+K+LK +   +   A  +   +A  + Y+H     I+HRD+KP N+++  ++   +K+ DFG S
Sbjct:  152 KQFRREVEIQSSLRHPNLTQLYGYFHDEKRVYLLMEYLVNGELYKHLKGRSHFNDVVASYYVYQMADALDYMHERN--ILHRDIKPENIIIGFNNT--IKLTDFGWS 254          

HSP 2 Score: 43.8986 bits (102), Expect = 4.919e-19
Identity = 16/38 (42.11%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPP 510
            G+  Y++PE+ + R+Y++KVDV++  ++ YE+L G PP
Sbjct:  268 GTVDYLSPELIRSREYNEKVDVWALGVLTYELLVGSPP 305          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: MYLKA_DICDI (Myosin light chain kinase A OS=Dictyostelium discoideum GN=mlkA PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.946e-19
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 2
Query:   23 QDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKV--GDFGLSKLI 352
            ++ + EV++L K+ HPNI+         + L L+ E + GG+L   + EKG+ S + A N    I   + YLH     I+HRDLKP N LL+ S  +HL+V   DFGLSK+I
Sbjct:   50 KNLKMEVDILKKVNHPNIIALKELFDTPEKLYLVMELVTGGELFDKIVEKGSYSEADAANLVKKIVSAVGYLHGLN--IVHRDLKPEN-LLLKSKENHLEVAIADFGLSKII 158          

HSP 2 Score: 38.5058 bits (88), Expect = 4.946e-19
Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPP 510
            G+  Y+APEV     YDK+VD++S  +I Y +L G PP
Sbjct:  169 GTPSYVAPEVLNATGYDKEVDMWSIGVITYILLCGFPP 206          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: ROCO4_DICDI (Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum GN=roco4 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.207e-19
Identity = 45/127 (35.43%), Postives = 69/127 (54.33%), Query Frame = 2
Query:   23 QDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADH---LKVGDFGLSKLIKGQNSHDVYK*LG 391
            Q+F+ EV ++  L HPNIV+  G +    P  ++ E++  GDL H+ L +   +  S  +   LDIA G+ Y+ N+   I+HRDL+  N+ L +   +     KV DFGLS+    Q+ H V   LG
Sbjct: 1073 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLG 1193          

HSP 2 Score: 45.8246 bits (107), Expect = 6.207e-19
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 1
Query:  382 MTGETGSYRYMAPEVF--KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 549
            ++G  G++++MAPE    +   Y +K D +SFAMILY +L GE P   Y  Y   K++
Sbjct: 1188 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFI 1244          
BLAST of CK739758 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.169e-19
Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = 2
Query:   38 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKGQNS 367
            ++  L KL+HPNI+ F G  T+     ++ E+   G L++ L+    ++PS  V++++ IA GM YLH   + IIHRDLK  N+L+     D +K+ DFG SK +  +++
Sbjct:  194 DIKHLRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLRAGRPVTPSLLVDWSMGIAGGMNYLH--LHKIIHRDLKSPNMLITYD--DVVKISDFGTSKELSDKST 299          

HSP 2 Score: 42.3578 bits (98), Expect = 8.169e-19
Identity = 17/38 (44.74%), Postives = 28/38 (73.68%), Query Frame = 1
Query:  397 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPP 510
            G+  +MAPEV ++    +KVD++SF ++L+E+L GE P
Sbjct:  305 GTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIP 342          
The following BLAST results are available for this feature:
BLAST of CK739758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ROCO6_DICDI4.755e-1940.35Probable serine/threonine-protein kinase roco6 OS=... [more]
LIMK2_CHICK4.862e-1942.59LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2... [more]
LIMK2_HUMAN4.862e-1942.59LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 ... [more]
LIMK2_RAT4.862e-1942.59LIM domain kinase 2 OS=Rattus norvegicus GN=Limk2 ... [more]
LIMK2_BOVIN4.862e-1942.59LIM domain kinase 2 OS=Bos taurus GN=LIMK2 PE=2 SV... [more]
KDC2_DROME4.871e-1934.82Protein kinase DC2 OS=Drosophila melanogaster GN=P... [more]
IPL1_ASHGO4.919e-1934.58Spindle assembly checkpoint kinase OS=Ashbya gossy... [more]
MYLKA_DICDI4.946e-1940.18Myosin light chain kinase A OS=Dictyostelium disco... [more]
ROCO4_DICDI6.207e-1935.43Probable serine/threonine-protein kinase roco4 OS=... [more]
M3K12_RAT8.169e-1936.36Mitogen-activated protein kinase kinase kinase 12 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6148 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739758 ID=CK739758; Name=CK739758; organism=Citrus sinensis; type=EST; length=550bp
TTCAGATGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGC
TGGTGAAACTTCGCCATCCTAATATAGTCCAATTCCTGGGAGCGGTCACC
GAGAGGAAGCCCCTTATGTTAATTACCGAGTATTTACGAGGGGGTGATCT
TCATAAGTATCTCAAGGAAAAGGGTGCACTTAGTCCTTCAACAGCTGTTA
ACTTTGCACTGGACATTGCCAGAGGCATGGCTTATCTTCACAATGAACCA
AATGTCATAATTCATCGAGACCTGAAGCCAAGGAATGTTCTTCTGGTCAA
CTCAAGTGCTGACCACTTGAAAGTTGGAGATTTTGGACTAAGCAAGCTCA
TCAAGGGTCAGAATTCTCATGATGTGTACAAATGACTGGGGAGACTGGGA
GTTACCGGTATATGGCTCCTGAGGTCTTCAAGCACCGGAAATACGACAAG
AAGGTTGATGTTTTCTCTTTTGCAATGATACTCTATGAGATGCTTGAAGG
AGAACCACCACTTGCAAATTACGAGCCTTATGAAGCAGCAAAATATGTGG
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