CK739762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_VIBPA (Elongation factor Tu OS=Vibrio parahaemolyticus GN=tufA PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 97/145 (66.90%), Postives = 116/145 (80.00%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 T TGVEMF+K LDE AG+NVG LLRG ++ +++RG VLAKPG+ITPHTKF + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +S E +MVMPGD I+MVVELI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 255 TCTGVEMFRKLLDEGRAGENVGALLRGTKRDEVERGQVLAKPGSITPHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGDIS-----LPEGVEMVMPGDNIQMVVELIAPIAMDEGLRFAIREGGRTVGAGVVAKIFE 394
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_PROVI (Elongation factor Tu OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 97/142 (68.31%), Postives = 112/142 (78.87%), Query Frame = 1 Query: 10 VTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 435 VTG+EMFQK LDE AGDN GLLLRGV K D++RGMV+AKPGTI PHTKF A VY+LKKEEGGRH+PFF YRPQFY RTTDVTG VS E +MVMPGD + + VELI P+A ++G+RFAIREGG+TVGAG + I Sbjct: 255 VTGIEMFQKLLDEGQAGDNAGLLLRGVDKNDLERGMVIAKPGTIKPHTKFKAEVYILKKEEGGRHTPFFTNYRPQFYFRTTDVTGAVS-----LPEGVEMVMPGDNLSVEVELIAPIAMDEGLRFAIREGGRTVGAGSVTKI 391
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBL (Elongation factor Tu OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 96/143 (67.13%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 13 TGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TG+EMF+K LDEAMAGDN+G LLRG+Q+ +IQRG VLAKPG++TPH KF+ VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I M VELI PVA + +RFAIREGG+TVG+GV+ +I E Sbjct: 260 TGIEMFRKILDEAMAGDNIGALLRGIQRDEIQRGQVLAKPGSVTPHKKFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSI-----NLPEGVEMVMPGDHIDMAVELITPVAMHENLRFAIREGGRTVGSGVVTTISE 397
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 96/143 (67.13%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 13 TGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TG+EMF+K LDEAMAGDN+G LLRG+Q+ +IQRG VLAKPG++TPH KF+ VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I M VELI PVA + +RFAIREGG+TVG+GV+ +I E Sbjct: 260 TGIEMFRKILDEAMAGDNIGALLRGIQRDEIQRGQVLAKPGSVTPHKKFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSI-----NLPEGVEMVMPGDHIDMAVELITPVAMHENLRFAIREGGRTVGSGVVTTISE 397
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 96/143 (67.13%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 13 TGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TG+EMF+K LDEAMAGDN+G LLRG+Q+ +IQRG VLAKPG++TPH KF+ VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I M VELI PVA + +RFAIREGG+TVG+GV+ +I E Sbjct: 260 TGIEMFRKILDEAMAGDNIGALLRGIQRDEIQRGQVLAKPGSVTPHKKFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSI-----NLPEGVEMVMPGDHIDMAVELITPVAMHENLRFAIREGGRTVGSGVVTTISE 397
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB1 (Elongation factor Tu OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 96/143 (67.13%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 13 TGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TG+EMF+K LDEAMAGDN+G LLRG+Q+ +IQRG VLAKPG++TPH KF+ VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD I M VELI PVA + +RFAIREGG+TVG+GV+ +I E Sbjct: 260 TGIEMFRKILDEAMAGDNIGALLRGIQRDEIQRGQVLAKPGSVTPHKKFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDVTGSI-----NLPEGVEMVMPGDHIDMAVELITPVAMHENLRFAIREGGRTVGSGVVTTISE 397
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPD (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 96/144 (66.67%), Postives = 115/144 (79.86%), Query Frame = 1 Query: 10 VTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 VTG+EMFQK LDE AGDN GLLLRGV K +++RGMV+AKPGTI PHTKF A VY+L+KEEGGRH+PFF GYRPQFY RTTDVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 255 VTGIEMFQKLLDEGQAGDNAGLLLRGVDKTELERGMVIAKPGTIKPHTKFKAEVYILRKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLSVDVELIVPIAMDENLRFAIREGGRTVGAGSVTKIIE 393
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_BAUCH (Elongation factor Tu OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 93/145 (64.14%), Postives = 117/145 (80.69%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 T TGVEMF+K LDE AG+N+G+LLRGV++ D++RG VLAKPG+I PHTKF + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + + +MVMPGD IKM+V LI P+A +QG+RFAIREGG+TVGAG++ IIE Sbjct: 255 TCTGVEMFRKLLDEGRAGENIGVLLRGVKRDDVERGQVLAKPGSIKPHTKFASEVYILNKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPIDVEMVMPGDNIKMIVNLIAPIAMDQGLRFAIREGGRTVGAGIVTDIIE 394
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_NITOC (Elongation factor Tu OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 4.234e-50 Identity = 94/143 (65.73%), Postives = 114/143 (79.72%), Query Frame = 1 Query: 13 TGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TGVEMF+K LDE AGDNVG+LLRG ++ D++RG VLAKP +ITPHTKF A VYVL K+EGGRH+PFF GYRPQFY RTTDVTG + D + +MVMPGD I+M V LI P+A E+G+RFA+REGG+TVGAGV+ +IE Sbjct: 259 TGVEMFRKLLDEGRAGDNVGVLLRGTKREDVERGQVLAKPKSITPHTKFYAEVYVLSKDEGGRHTPFFTGYRPQFYFRTTDVTGAI-----DLPDGVEMVMPGDNIQMTVSLIAPIAMEEGLRFAVREGGRTVGAGVVSKVIE 396
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_METI4 (Elongation factor Tu OS=Methylacidiphilum infernorum (isolate V4) GN=tuf PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 4.234e-50 Identity = 99/144 (68.75%), Postives = 116/144 (80.56%), Query Frame = 1 Query: 10 VTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 VT +EMF+KTLD A AGDNVGLLLRG++K D++RG V+AKPGTITPH KF A VYVLKKEEGGRH+ FF GYRPQF+ RTTDVTG V+ E +MVMPGD ++ +VELI P+A E+ MRFAIREGGKTVGAGV+ IIE Sbjct: 256 VTDIEMFRKTLDTAEAGDNVGLLLRGIKKDDVERGQVVAKPGTITPHHKFNAQVYVLKKEEGGRHTAFFNGYRPQFFFRTTDVTGTVT-----LKEGVEMVMPGDNVEFMVELISPIAMEKSMRFAIREGGKTVGAGVVTEIIE 394 The following BLAST results are available for this feature:
BLAST of CK739762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739762 ID=CK739762; Name=CK739762; organism=Citrus sinensis; type=EST; length=545bpback to top |