CK739762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.112e-58 Identity = 108/145 (74.48%), Postives = 124/145 (85.52%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TVTG+EMFQKTLDE +AGDNVG+LLRGVQK DI+RGMVLAKPG+ITPH KF A VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG +S D ++MV+PGDRIKM VELI PVA EQGMRFAIREGG+TVGAG++ I++ Sbjct: 266 TVTGLEMFQKTLDEGLAGDNVGVLLRGVQKQDIERGMVLAKPGSITPHDKFEAEVYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGNISQFTTDDGGSAEMVLPGDRIKMTVELIHPVAIEQGMRFAIREGGRTVGAGIVSKILD 410
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_PROMT (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL2A) GN=tuf PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.452e-58 Identity = 109/145 (75.17%), Postives = 124/145 (85.52%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL K G+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 255 TVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKKGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELIAPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_PROM5 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9515) GN=tuf PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.452e-58 Identity = 110/145 (75.86%), Postives = 124/145 (85.52%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 255 TVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGANVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_PROM1 (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL1A) GN=tuf PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.452e-58 Identity = 109/145 (75.17%), Postives = 124/145 (85.52%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL K G+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 255 TVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKKGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELIAPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.452e-58 Identity = 106/145 (73.10%), Postives = 125/145 (86.21%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 T+TG+EMFQKTLDE MAGDN+G+LLRGVQK DI+RGMVLA+PGTITPHT+F A VY+L KEEGGRH+PFF+GYRPQFY+RTTDVTG ++ D ++MVMPGDRIKM ELI P+A EQGMRFAIREGG+TVGAGV+ I+E Sbjct: 265 TITGLEMFQKTLDEGMAGDNIGILLRGVQKKDIERGMVLAQPGTITPHTQFEAEVYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGTITQFTADDGSAAEMVMPGDRIKMSAELINPIAIEQGMRFAIREGGRTVGAGVVSKILE 409
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_SYNP2 (Elongation factor Tu OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tuf PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.235e-58 Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TVTGVEMFQKTLDE MAGDNVG+LLRGVQK DI+RGMVLAKPG+ITPHT F A VYVL KEEGGRH+PFF YRPQFY+RTTDVTG +S+ D ++MVMPGDRIKM VELI P+A EQGMRFAIREGG+T+GAG + I++ Sbjct: 265 TVTGVEMFQKTLDEGMAGDNVGVLLRGVQKDDIERGMVLAKPGSITPHTNFEAEVYVLTKEEGGRHTPFFPNYRPQFYVRTTDVTGTISAFTADDGSSAEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGTVSKILK 409
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.235e-58 Identity = 105/145 (72.41%), Postives = 127/145 (87.59%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TVTG+EMFQKTLDE +AGDNVG+LLRG+QK +++RGMVLAKP TITPHT+F + VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG ++S D + +MVMPGDR++M VELI P+A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 265 TVTGLEMFQKTLDEGIAGDNVGVLLRGIQKNEVERGMVLAKPKTITPHTQFESEVYVLKKEEGGRHTPFFAGYRPQFYVRTTDVTGTITSFTADDGSKPEMVMPGDRVRMTVELIQPIAIEQGMRFAIREGGRTVGAGVVSKILK 409
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_PROMP (Elongation factor Tu OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tuf PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.235e-58 Identity = 110/145 (75.86%), Postives = 123/145 (84.83%), Query Frame = 1 Query: 7 TVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 TVTGVEMF+K LDE MAGDNVGLLLRGVQK DI+RGMVL K G+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ D +MVMPGDRIKM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 255 TVTGVEMFRKLLDEGMAGDNVGLLLRGVQKEDIERGMVLVKKGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGANVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_TRIEI (Elongation factor Tu OS=Trichodesmium erythraeum (strain IMS101) GN=tuf PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 4.225e-58 Identity = 110/147 (74.83%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 1 NFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 N TVTGVEMFQK LDE MAGDNVGLLLRG+QK DIQRGMVLAK G+ITPH KF + VYVLKKEEGGRH+PFF YRPQFY+RTTDVTG + S D ++MVMPGDRIKM V+LI PVA EQGMRFAIREGG+T+GAGV+ I+E Sbjct: 263 NSTVTGVEMFQKILDEGMAGDNVGLLLRGMQKDDIQRGMVLAKSGSITPHKKFESEVYVLKKEEGGRHTPFFPNYRPQFYIRTTDVTGAIESFTADDGSVAEMVMPGDRIKMTVQLINPVAIEQGMRFAIREGGRTIGAGVVSKIVE 409
BLAST of CK739762 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAT (Elongation factor Tu, chloroplastic OS=Chlorokybus atmophyticus GN=tufA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 5.517e-58 Identity = 105/144 (72.92%), Postives = 126/144 (87.50%), Query Frame = 1 Query: 10 VTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 441 VTG+EMFQKTL+E++AGDNVG+LLRG+QK DI+RGMVLAKPGTI PH F A VY+L KEEGGRH+PFF GYRPQFY+RTTDVTG++ S D E++MVMPGDRIKMVV+LI P+A E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 267 VTGLEMFQKTLEESVAGDNVGILLRGIQKKDIERGMVLAKPGTIKPHKSFEAQVYILNKEEGGRHTPFFQGYRPQFYVRTTDVTGKIESFQADDGSETQMVMPGDRIKMVVQLIQPIAIEKGMRFAIREGGRTVGAGVVFNILE 410 The following BLAST results are available for this feature:
BLAST of CK739762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739762 ID=CK739762; Name=CK739762; organism=Citrus sinensis; type=EST; length=545bpback to top |