CK739784

Overview
NameCK739784
Unique NameCK739784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.049e-31
Identity = 73/169 (43.20%), Postives = 104/169 (61.54%), Query Frame = 2
Query:   20 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF--RKATVPLSWATRMMIAFGAAKGLAFLHNAERP-VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVMGT 517
            ++G G FG VY+G + +  +V       AVKV       G   ++ EV+ L Q+RH NLV   G+C E   ++LVYE++  GSL +HL+  R     L+W +R+ +A  AAKGL +LHN   P +I+RD K+SNILLD D  AK+SDFGL+K   + D +H++T V GT
Sbjct:  611 VIGRGSFGAVYRGKLPDGKQV-------AVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGT 772          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.049e-31
Identity = 72/168 (42.86%), Postives = 109/168 (64.88%), Query Frame = 2
Query:   20 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF-RKATVPLSWATRMMIAFGAAKGLAFLHN-AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVMGT 517
            ILG+GGFG VY G+++   +V       AVK+L+    QG++++  EV  L ++ H NLV L+GYC E D+  L+YE+M  G L+ H+   +    L+W TR+ I   +A+GL +LHN  + P+++RD KT+NILL+  + AKL+DFGL+++     +THVST V GT
Sbjct:  583 ILGKGGFGMVYHGFVNGTEQV-------AVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGT 743          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.049e-31
Identity = 73/168 (43.45%), Postives = 107/168 (63.69%), Query Frame = 2
Query:   20 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVMGT 517
            +LG+GGFG VY G +  + +V       AVKVL++   QG +E+  EV+ L ++ H NLV L+GYCCE D+  LVYEF+  G L+ HL  K     ++W+ R+ IA  AA GL +LH     P+++RD KT+NILLD ++ AKL+DFGL+++     ++  ST + GT
Sbjct:  569 VLGKGGFGMVYHGTVKGSEQV-------AVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGT 729          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.369e-31
Identity = 72/166 (43.37%), Postives = 108/166 (65.06%), Query Frame = 2
Query:   23 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN-AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVMGT 517
            +G GG+G VYKG +  N +V      +A+K   +  +QG  E+ TE+  L ++ H N+VKL+G+C +   ++LVYE++  GSL + L  K  V L W  R+ IA G+ KGLA+LH  A+ P+I+RD K++NILLD   TAK++DFGL+K     ++ HV+T+V GT
Sbjct:  640 VGGGGYGQVYKGTLP-NGQV------IAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGT 798          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.369e-31
Identity = 76/168 (45.24%), Postives = 107/168 (63.69%), Query Frame = 2
Query:   20 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER-PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVMGT 517
            +LG+GGFGTVY G +D           VAVK+L+    QG++E+  EV  L ++ H +LV L+GYC + D+  L+YE+M  G L EN   ++    L+W  RM IA  AA+GL +LHN  R P+++RD KT+NILL+    AKL+DFGL+++ P   + HVST V GT
Sbjct:  589 VLGKGGFGTVYHGNLD--------GAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGT 748          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.789e-31
Identity = 75/170 (44.12%), Postives = 106/170 (62.35%), Query Frame = 2
Query:   23 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA----GPQGDQTHVSTRVMGT 517
            +G GG+G VYKG++          L VAVK   +  LQG +E+ TE+  L +L H NLV L+GYC +   ++LVYE+M  GSL++ L  +   PLS A R+ IA G+A+G+ +LH  A+ P+I+RD K SNILLDS    K++DFG++K     G    + HV+T V GT
Sbjct:  637 IGRGGYGKVYKGHLPGG-------LVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGT 799          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.789e-31
Identity = 72/168 (42.86%), Postives = 108/168 (64.29%), Query Frame = 2
Query:   20 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF-RKATVPLSWATRMMIAFGAAKGLAFLHN-AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVMGT 517
            +LG+GGFG VY G ++   +V       AVK+L+    QG++E+  EV  L ++ H NLV L+GYC E ++  L+YE+M  G L  H+  ++    L+W TR+ I   +A+GL +LHN  + P+++RD KT+NILL+    AKL+DFGL+++ P   +THVST V GT
Sbjct:  597 VLGKGGFGMVYHGTVNNTEQV-------AVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGT 757          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.051e-31
Identity = 79/180 (43.89%), Postives = 110/180 (61.11%), Query Frame = 2
Query:    2 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF-RKATVP-----LSWATRMMIAFGAAKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVMGTY 520
            +F  + + G GGFG VY G ID   +V       A+K  ++   QG  E+ TE+  L +LRH +LV LIG+C E+   +LVYE+M  G L +HL+  K   P     LSW  R+ I  G+A+GL +LH  A + +I+RD KT+NILLD +  AK+SDFGL+K  P  D+ HVST V G++
Sbjct:  524 NFDENAVCGVGGFGKVYIGEIDGGTQV-------AIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPM-DEGHVSTAVKGSF 695          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.051e-31
Identity = 75/174 (43.10%), Postives = 113/174 (64.94%), Query Frame = 2
Query:    5 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAT----VPLSWATRMMIAFGAAKGLAFLHNAERP-VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVM 511
            F ++ ++G GGFG VYK  + +   V +K L   +++      QG RE++ E+  +G+++H NLV L+GYC   + RLLVYE+M  GSLE  L  K++    + L+WA R  IA GAA+GLAFLH++  P +I+RD K+SN+LLD D+ A++SDFG+A+     D TH+S   +
Sbjct:  859 FSAETMVGSGGFGEVYKAQLRDGSVVAIKKL---IRITG----QGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALD-THLSVSTL 1024          
BLAST of CK739784 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.985e-31
Identity = 76/173 (43.93%), Postives = 111/173 (64.16%), Query Frame = 2
Query:    5 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF---RKATVPLSWATRMMIAFGAAKGLAFLHNAERP-VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDQTHVSTRVM 511
            F +D ++G GGFG VYK  + +   V +K L   ++V      QG RE++ E+  +G+++H NLV L+GYC   + RLLVYE+M  GSLE  L    +K  + L W+ R  IA GAA+GLAFLH++  P +I+RD K+SN+LLD D+ A++SDFG+A+     D TH+S   +
Sbjct:  858 FSADSMIGSGGFGDVYKAKLADGSVVAIKKL---IQVTG----QGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALD-THLSVSTL 1022          
The following BLAST results are available for this feature:
BLAST of CK739784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5487_ARATH1.049e-3143.20Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH1.049e-3142.86Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH1.049e-3143.45Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y5977_ARATH1.369e-3143.37Probable leucine-rich repeat receptor-like protein... [more]
Y1518_ARATH1.369e-3145.24Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH1.789e-3144.12Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH1.789e-3142.86Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y5613_ARATH3.051e-3143.89Probable receptor-like protein kinase At5g61350 OS... [more]
BRL1_ARATH3.051e-3143.10Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL3_ARATH3.985e-3143.93Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6174 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739784 ID=CK739784; Name=CK739784; organism=Citrus sinensis; type=EST; length=521bp
GAGCTTTCGCTCTGATTATATTCTCGGAGAAGGCGGTTTTGGCACCGTCT
ATAAAGGTTACATTGATGAGAATGTGAGGGTCGGCCTCAAATCTTTACCC
GTTGCCGTCAAGGTCCTCAATAAGGAAGGCCTTCAGGGACACCGTGAATG
GCTTACGGAGGTCAACTTCCTAGGTCAACTTAGGCATCCGAATCTGGTTA
AATTGATTGGGTATTGTTGCGAGGACGATCACAGGTTACTTGTGTATGAG
TTCATGTTCAGAGGAAGCCTTGAGAATCACTTGTTTCGAAAGGCAACTGT
CCCACTATCATGGGCCACAAGAATGATGATTGCTTTTGGAGCTGCCAAAG
GGCTTGCTTTCCTTCACAATGCTGAAAGGCCAGTTATATATCGGGACTTC
AAAACCTCTAATATCTTATTGGACTCAGATTATACAGCCAAGCTTTCTGA
TTTTGGTCTTGCAAAAGCTGGACCGCAAGGTGACCAGACTCATGTATCAA
CTCGAGTAATGGGTACCTATG
back to top