CK739787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.625e-27 Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA Sbjct: 144 GLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLA 202
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.625e-27 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA Sbjct: 146 GLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 204
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.625e-27 Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA Sbjct: 105 GLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 163
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.257e-26 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPLGEV DPLYPGG+FDPLGLA Sbjct: 142 GLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLA 200
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.658e-26 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSIL+IWA QV+LMGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA Sbjct: 141 GLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 199
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.390e-25 Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGN SLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LA Sbjct: 122 GLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALA 180
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 5.282e-25 Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNP+LIHAQSILAIWACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLA Sbjct: 142 GLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLA 200
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 6.898e-25 Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNP+L+HAQSILAIWACQVVLMGAVEGYR+ GGPLGE D LYPGG+FDPLGLA Sbjct: 141 GLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLA 199
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.007e-24 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLYPG +FDPLGLA Sbjct: 27 GLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLA 85
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.471e-24 Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE DPLYPGG+FDPLGLA Sbjct: 142 GLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLA 200 The following BLAST results are available for this feature:
BLAST of CK739787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739787 ID=CK739787; Name=CK739787; organism=Citrus sinensis; type=EST; length=179bpback to top |