CK739787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.944e-19 Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GL+YLGNPSLIHAQ+I+A A QVVLMG VEGYR+ GGP GE DPLYPG +FDPLGLA Sbjct: 151 GLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLA 209
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.539e-19 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLG+P+LIHAQ+I+A A QVVLMG +EGYR+ GGP GE DPLYPG SFDPLGLA Sbjct: 133 GLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLA 191
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.452e-15 Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLA 179 GLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLA Sbjct: 141 GLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLA 200
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.195e-14 Identity = 41/61 (67.21%), Postives = 44/61 (72.13%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLA 179 GL+YLGN SLIHAQSI+A A QVVLMG E YR GG G + D LYPGG FDPLGLA Sbjct: 128 GLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLA 188
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.344e-14 Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLA 179 GLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G +GE D LYPGG FDPLGLA Sbjct: 144 GLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLA 203
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11 Identity = 37/54 (68.52%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 27 SLIHAQSILAIWACQVVLMGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLA 179 +LIHA+S+LAI A QV+LMGAVEGYR A G GE D LYPGG FDPLGLA Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLA 57 The following BLAST results are available for this feature:
BLAST of CK739787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739787 ID=CK739787; Name=CK739787; organism=Citrus sinensis; type=EST; length=179bpback to top |