CK739799

Overview
NameCK739799
Unique NameCK739799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK739799 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.396e-35
Identity = 71/108 (65.74%), Postives = 80/108 (74.07%), Query Frame = 2 
Query:   50 LKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELW 373
            LKV  IVVIGHS CGGIK L+S     ++S  F+EDWV+IG PAK KV TE    PF DQCT  EKEAVNVSL NLLTYPFV+EG+ N TL L GG+YDFV+G FE W
Sbjct:  215 LKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322
The following BLAST results are available for this feature:
BLAST of CK739799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CAHC_HORVU3.396e-3565.74Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6189 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739799 ID=CK739799; Name=CK739799; organism=Citrus sinensis; type=EST; length=426bp
GACTAAGTATGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATC
TCAAGGTTTCAAACATTGTGGTTATTGGGCACAGCGCCTGTGGCGGCATC
AAAGGACTCATGTCTTTCCCATTTGATGGAAACAACTCCACCGATTTCAT
TGAAGACTGGGTGAAAATTGGCATCCCTGCCAAGTCTAAGGTGTTAACAG
AGCATGGTGACAAGCCTTTTGGAGACCAATGCACATACTGTGAAAAGGAG
GCGGTGAATGTGTCCCTCAGTAATCTGCTAACGTATCCATTTGTGAGAGA
AGGCTTGGTGAACAAAACTCTGGCACTCAAGGGTGGGTACTATGATTTCG
TTAATGGATCATTCGAGCTCTGGGGTCTCGACTTTGGCCTTTCTCCTCCA
CTCTCCGTATGAACATCAACCGTTAT
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