CK739800

Overview
NameCK739800
Unique NameCK739800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.798e-31
Identity = 74/163 (45.40%), Postives = 109/163 (66.87%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIKEREP*ESNSTSRVPTKLTAQ 487
            L  SLE++Y G+TK+MKI+R   +  G+T++ E+ IL I +K GWK+GTKITFP++G+  P+ IPAD+VFV+ +KPH+ F RDG +++ +  ISL EAL G TV++ T+DGR + +P N+VI P   + +  EG+P  K P  +R         R P +LT Q
Sbjct:  175 LRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVP-TQRGDLIVEFKVRFPDRLTPQ 336          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.798e-31
Identity = 74/163 (45.40%), Postives = 109/163 (66.87%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIKEREP*ESNSTSRVPTKLTAQ 487
            L  SLE++Y G+TK+MKI+R   +  G+T++ E+ IL I +K GWK+GTKITFP++G+  P+ IPAD+VFV+ +KPH+ F RDG +++ +  ISL EAL G TV++ T+DGR + +P N+VI P   + +  EG+P  K P  +R         R P +LT Q
Sbjct:  175 LRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVP-TQRGDLIVEFKVRFPDRLTPQ 336          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.798e-31
Identity = 74/163 (45.40%), Postives = 109/163 (66.87%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRPIKEREP*ESNSTSRVPTKLTAQ 487
            L  SLE++Y G+TK+MKI+R   +  G+T++ E+ IL I +K GWK+GTKITFP++G+  P+ IPAD+VFV+ +KPH+ F RDG +++ +  ISL EAL G TV++ T+DGR + +P N+VI P   + +  EG+P  K P  +R         R P +LT Q
Sbjct:  175 LRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVP-TQRGDLIVEFKVRFPDRLTPQ 336          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.144e-27
Identity = 66/138 (47.83%), Postives = 89/138 (64.49%), Query Frame = 2
Query:   11 SLEDLYKGTTKKMKISREIADISGKTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNI-PINNVIHPTYEEIVPREGMPPSKRP 421
            SLE++ KG  KKMKISR     +G   + E++L I VKPGWK GTKITFP++G+  PN  PAD+VF+I +KPHS+F R+G DL  T +ISL +AL G  V + TL G  + + P + +I PT    +   G+P  K P
Sbjct:  166 SLEEVDKGCIKKMKISRMATGSNGPYKE-EKVLRITVKPGWKAGTKITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPNHEIIKPTTTRRINGLGLPVPKEP 302          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.414e-21
Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = 2
Query:    2 LPCSLEDLYKGTTKKMKISREIADISGKTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNV-IPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINNVIHPTYEEIVPREGMPPSKRP 421
            LP SLEDL+ G  K  KI R+    + +  Q++    I +KPGWK GTKIT+  +G+  P       L FVI EK H  F RDG+DLI T  +S  E+L G +  + T+DGR+L +     + P+     P +GMP  K P
Sbjct:  186 LPVSLEDLFVGKKKSFKIGRKGPHGASEKTQID----IQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNP 322          

HSP 2 Score: 22.7126 bits (47), Expect = 1.414e-21
Identity = 11/24 (45.83%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  405 PLQKDPSKRGNL--ENQIQHPGSL 470
            P  K+PS+RGNL  + ++ +P SL
Sbjct:  317 PTPKNPSQRGNLIVKYKVDYPISL 340          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17
Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNI--PINNVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++  +IL + V  G K G +ITF  + ++ P V P D+V ++ EK H VF RDGNDL +T KI L EAL G       LDGR + +  P   VI P    +V  EGMP  + P ++
Sbjct:  209 KVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEK 326          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17
Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNI--PINNVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++  +IL + V  G K G +ITF  + ++ P V P D+V ++ EK H VF RDGNDL +T KI L EAL G       LDGR + +  P   VI P    +V  EGMP  + P ++
Sbjct:  209 KVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEK 326          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.954e-17
Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 2
Query:   29 KGTTKKMKISREIADISG-KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRP 421
            KGT + +          G K +Q +++L + V+ G + G KITFP + +E P+ +  D+VFV+ +K H  F R G DL     +SL EAL G    LT LDGR L I  N   V+ P   + +  EGMP  +RP
Sbjct:  195 KGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRP 328          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.954e-17
Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRP 421
            K +Q +++L + V+ G + G +ITFP + +E P+ +  D+VFV+ +K H  F R G+DL     +SL EAL G    LT LDGR L I  N   V+ P   + +  EGMP  +RP
Sbjct:  193 KVVQEKKVLEVHVEKGMQNGQRITFPGEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRP 307          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.549e-16
Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 2
Query:   29 KGTTKKMKISREIADISG-KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRP 421
            KGT + +          G K +Q +++L + V+ G + G KITFP + +E P+ +  D+VFV+ +K H  F R G+DL     +SL EAL G    LT LD R L I  N   VI P   + +  EGMP  +RP
Sbjct:  195 KGTGEMISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRP 328          
The following BLAST results are available for this feature:
BLAST of CK739800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DNJB5_MOUSE3.798e-3145.40DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN3.798e-3145.40DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN3.798e-3145.40DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ1_DROME1.144e-2747.83DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
SIS1_YEAST1.414e-2140.43Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJA2_HUMAN3.121e-1740.68DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN3.121e-1740.68DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJH_ATRNU6.954e-1738.06DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJH1_ALLPO6.954e-1740.00DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH2_ALLPO1.549e-1638.06DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6190 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739800 ID=CK739800; Name=CK739800; organism=Citrus sinensis; type=EST; length=572bp
GTTGCCTTGTAGCCTTGAGGATCTCTATAAGGGGACCACTAAGAAGATGA
AGATCTCTAGAGAGATAGCTGATATAAGTGGCAAGACTATGCAGGTAGAG
GAAATTCTAACTATTGATGTGAAGCCCGGATGGAAGAAGGGTACAAAGAT
CACCTTCCCTGAGAAAGGAAATGAGCAGCCAAATGTTATACCTGCTGATC
TTGTATTCGTTATTGATGAGAAGCCTCACAGTGTATTTACTCGGGATGGA
AATGATTTGATTGTCACACAGAAGATATCTCTTGCAGAAGCATTGACAGG
TCATACAGTTCATCTCACCACCCTAGATGGGAGAAGTTTAAACATCCCAA
TCAACAATGTGATTCATCCCACCTACGAGGAAATTGTCCCAAGAGAAGGA
ATGCCCCCTTCAAAAAGACCCATCAAAGAGAGGGAACCTTGAGAATCAAA
TTCAACATCCAGGGTCCCTACTAAGTTGACCGCCCAGCCACAAGGGGGGA
ATCAAGAAACTCCTTTGGTCCCTGAAATAGATACACCCGGCAAATGATAT
TTTTCAGAAACAGAGCTTTTTG
back to top