CK739800

Overview
NameCK739800
Unique NameCK739800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.549e-16
Identity = 47/118 (39.83%), Postives = 65/118 (55.08%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNI--PINNVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++  +IL + V  G K G +ITF  + ++ P V P D+V ++ EK H VF RDGNDL +T KI L EAL G       LD R + +  P   VI P    +V  EGMP  + P ++
Sbjct:  209 KVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEK 326          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16
Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNI--PINNVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++  +IL + V  G K G +ITF  + ++ P V P D+V  + EK H VF RDGNDL +T KI L EAL G       LD R + +  P   VI P    +V  EGMP  + P ++
Sbjct:  209 KVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEK 326          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16
Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 2
Query:   29 KGTTKKMKISREIADISG-KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPI--NNVIHPTYEEIVPREGMPPSKRP 421
            KGT + +      +   G K +Q +++L + V+ G +   KITFP + +E P+ +  D+VFV+ +K H  F R G+DL V   +SL E+L G    LT LDGR L I      V+ P   + +  EGMP  +RP
Sbjct:  193 KGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRP 326          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRP 421
            K +  +++L ++V+ G +   KITF  + +E P+ +  D+VFV+ +K H  F R G DL V   +SL EAL G    LT LDGRSL I  N   V+ P   + +  EGMP  +RP
Sbjct:  214 KVIPEKKVLEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRP 328          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.688e-16
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 2
Query:   29 KGTTKKMKISREIADISG-KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNI--PINNVIHPTYEEIVPREGMPPSKRPIKE 430
            KG  +++         SG K ++ ++I+ + V+ G K G KI F  +G+++P + P D++ V+D+K HSVF R G+DLI+  KI L+EAL G    + TLD R L I      VI       V  EGMP  K P+++
Sbjct:  182 KGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEK 318          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.004e-15
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 2
Query:   29 KGTTKKMKISREIADISG-KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPINN--VIHPTYEEIVPREGMPPSKRPIKE 430
            KG  +++       + SG K  + ++I+ + V+ G K G KI F  +G+++P + P D++ V+D+K HSVF R G DLI+  KI L+EAL G    + TLD R L I   +  VI     + +  EGMP  K P+++
Sbjct:  182 KGQGERINPKDRCENCSGAKVTREKKIIEVHVEKGMKDGQKILFHGEGDQEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEK 318          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++ ++IL + +  G K G KITF  +G+++P + P D++ V+D+K H+VFTR G DL +   I L EAL G    ++TLD R++ I  +   ++     + V  EGMP  +RP ++
Sbjct:  200 KIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEK 317          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++ ++IL + +  G K G KITF  +G+++P + P D++ V+D+K H+VFTR G DL +   I L EAL G    ++TLD R++ I  +   ++     + V  EGMP  +RP ++
Sbjct:  199 KIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEK 316          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++ ++IL + +  G K G KITF  +G+++P + P D++ V+D+K H+VFTR G DL +   I L EAL G    ++TLD R++ I  +   ++     + V  EGMP  +RP ++
Sbjct:  200 KIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEK 317          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++ ++IL + +  G K G KITF  +G+++P + P D++ V+D+K H+VFTR G DL +   I L EAL G    ++TLD R++ I  +   ++     + V  EGMP  +RP ++
Sbjct:  200 KIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEK 317          
The following BLAST results are available for this feature:
BLAST of CK739800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DNJA2_MOUSE1.549e-1639.83DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_RAT2.023e-1639.83DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJH_CUCSA3.451e-1636.57DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNAJ3_ARATH5.887e-1640.00Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJA4_HUMAN7.688e-1637.23DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNJA4_MOUSE1.004e-1536.50DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA1_RAT1.713e-1536.44DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB1.713e-1536.44DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE1.713e-1536.44DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN1.713e-1536.44DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6190 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739800 ID=CK739800; Name=CK739800; organism=Citrus sinensis; type=EST; length=572bp
GTTGCCTTGTAGCCTTGAGGATCTCTATAAGGGGACCACTAAGAAGATGA
AGATCTCTAGAGAGATAGCTGATATAAGTGGCAAGACTATGCAGGTAGAG
GAAATTCTAACTATTGATGTGAAGCCCGGATGGAAGAAGGGTACAAAGAT
CACCTTCCCTGAGAAAGGAAATGAGCAGCCAAATGTTATACCTGCTGATC
TTGTATTCGTTATTGATGAGAAGCCTCACAGTGTATTTACTCGGGATGGA
AATGATTTGATTGTCACACAGAAGATATCTCTTGCAGAAGCATTGACAGG
TCATACAGTTCATCTCACCACCCTAGATGGGAGAAGTTTAAACATCCCAA
TCAACAATGTGATTCATCCCACCTACGAGGAAATTGTCCCAAGAGAAGGA
ATGCCCCCTTCAAAAAGACCCATCAAAGAGAGGGAACCTTGAGAATCAAA
TTCAACATCCAGGGTCCCTACTAAGTTGACCGCCCAGCCACAAGGGGGGA
ATCAAGAAACTCCTTTGGTCCCTGAAATAGATACACCCGGCAAATGATAT
TTTTCAGAAACAGAGCTTTTTG
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