CK739800

Overview
NameCK739800
Unique NameCK739800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++ ++IL + +  G K G KITF  +G+++P + P D++ V+D+K H+VFTR G DL +   I L EAL G    ++TLD R++ I  +   ++     + V  EGMP  +RP ++
Sbjct:  200 KIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEK 317          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN--NVIHPTYEEIVPREGMPPSKRPIKE 430
            K ++ ++IL + +  G K G KITF  +G+++P + P D++ V+D+K H+VFTR G DL +   I L EAL G    ++TLD R++ I  +   ++     + V  EGMP  +RP ++
Sbjct:  200 KIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEK 317          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 2
Query:   20 DLYKGTTKKMKISREIADISGKTMQVE-EILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPI--NNVIHPTYEEIVPREGMPPSK 415
            D+  GT   +         +GK ++ E +IL + V+PG K G +I F  + ++ P+VIP D+VF++ E+PH  F RDG+DL+   +I L  A+ G    L  + G  L + I    VI P   +++  +GMP  K
Sbjct:  186 DVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPK 320          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPI--NNVIHPTYEEIVPREGM 403
            K +   +ILT+ V+ G   G KI F E+G + P +IP D++FVID+K H  F R G+ L     + L  AL G  + +  LD R L IPI     I P   +++P +GM
Sbjct:  202 KVISQRKILTVHVEKGMHNGQKIVFKEEGEQAPGIIPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM 310          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.894e-14
Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 2
Query:   83 KTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPI--NNVIHPTYEEIVPREGMPPSKRP 421
            K +  +++L ++V+ G +   KITF  + +E P+ +  D+VFVI +K H  F R G DL V   ISL EAL G    LT LD R L I      V+ P   + +  EGMP  +RP
Sbjct:  215 KVVSEKKVLEVNVEKGMQHNQKITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRP 329          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.092e-13
Identity = 46/109 (42.20%), Postives = 62/109 (56.88%), Query Frame = 2
Query:   86 TMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTG-HTVHLTTLDGRSLNI--PINNVIHPTYEEIVPREGM 403
            T+  + +L+  V    K+  KI      +E   + P D++  + +KPH VF R G+DL    KISLAEALTG + V LTTLDGR L    PI  ++HP    I+P EGM
Sbjct:  215 TVPEQRMLSFFVNRSAKENDKIIQRGMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGM 323          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11
Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = 2
Query:   32 GTTKKMKISREIADISGK-TMQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSL--NIPINNVIHPTYEEIVPREGMP 406
            GT +K+K   +  +  GK  +Q ++I+   V+ G + G +I    +G+E P V P D++  I EKP+  F R+G++LI T+++ L +++ G    + TLD R L  N    ++I       +  EGMP
Sbjct:  220 GTGEKIKEEDKCKECKGKRVIQGKKIVQFQVEKGTRDGERIMLQGQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMP 347          
BLAST of CK739800 vs. ExPASy Swiss-Prot
Match: MAS5_ENCCU (Mitochondrial protein import protein mas5 OS=Encephalitozoon cuniculi GN=MAS5 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11
Identity = 33/89 (37.08%), Postives = 54/89 (60.67%), Query Frame = 2
Query:   89 MQVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFVIDEKPHSVFTRDGNDLIVTQKISLAEALTGHTVHLTTLDGRSLNIPIN 355
            +Q + +  +++KPG +KG KI F   G+++   +P D++F+ID +  S F R GNDL+    I L  A+ G  V+ T +DGR L I ++
Sbjct:  216 IQDKTMFEVNIKPGVRKGEKIVFEGMGDQRRGHVPGDVIFIIDVQEDSRFERCGNDLVGNIDIPLYTAIGGGVVYFTHIDGRQLEINVS 304          
The following BLAST results are available for this feature:
BLAST of CK739800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DNJA1_BOVIN1.713e-1536.44DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE1.713e-1536.44DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
MAS5_YEAST4.983e-1534.07Mitochondrial protein import protein MAS5 OS=Sacch... [more]
MAS5_SCHPO8.500e-1538.53Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNAJ2_ARATH1.894e-1439.13Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
XDJ1_SCHPO6.092e-1342.20DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
DNJA1_DICDI1.149e-1132.03DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
MAS5_ENCCU3.343e-1137.08Mitochondrial protein import protein mas5 OS=Encep... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6190 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739800 ID=CK739800; Name=CK739800; organism=Citrus sinensis; type=EST; length=572bp
GTTGCCTTGTAGCCTTGAGGATCTCTATAAGGGGACCACTAAGAAGATGA
AGATCTCTAGAGAGATAGCTGATATAAGTGGCAAGACTATGCAGGTAGAG
GAAATTCTAACTATTGATGTGAAGCCCGGATGGAAGAAGGGTACAAAGAT
CACCTTCCCTGAGAAAGGAAATGAGCAGCCAAATGTTATACCTGCTGATC
TTGTATTCGTTATTGATGAGAAGCCTCACAGTGTATTTACTCGGGATGGA
AATGATTTGATTGTCACACAGAAGATATCTCTTGCAGAAGCATTGACAGG
TCATACAGTTCATCTCACCACCCTAGATGGGAGAAGTTTAAACATCCCAA
TCAACAATGTGATTCATCCCACCTACGAGGAAATTGTCCCAAGAGAAGGA
ATGCCCCCTTCAAAAAGACCCATCAAAGAGAGGGAACCTTGAGAATCAAA
TTCAACATCCAGGGTCCCTACTAAGTTGACCGCCCAGCCACAAGGGGGGA
ATCAAGAAACTCCTTTGGTCCCTGAAATAGATACACCCGGCAAATGATAT
TTTTCAGAAACAGAGCTTTTTG
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