CK739810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.123e-13 Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 41 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 ++ ++ LMG E R A G +G L Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 161 IWATQVILMGAVEGYRV---AGNGPLGEAEDL---LYPGGSFDPL----------GLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 40 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 104
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 189 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 189 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 198 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 189 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP +D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 189 YPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253 The following BLAST results are available for this feature:
BLAST of CK739810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739810 ID=CK739810; Name=CK739810; organism=Citrus sinensis; type=EST; length=529bpback to top |