CK739810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP D +++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 180 YPGGSFDPL----------GLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 244
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 185 YPGGSFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 188 YPGGSFDPL----------GLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 41 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 ++ ++ LMGF E R G +G G +K Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DH+ADPV NN Sbjct: 132 IWASQVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 225
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 41 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 ++ +++ LMGF E R G +G G +K Y GG+ DP D + + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DH+ADPV NN Sbjct: 158 IWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDPL----------GLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 41 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 ++ +++ LMGF E R G +G G +K Y GG+ DP D + + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DH+ADPV NN Sbjct: 158 IWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDPL----------GLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.947e-12 Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GG+ DP D + D K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 202 YPGGNFDPL----------GLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.947e-12 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GG+ DP D ++ D K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 189 YPGGTFDPL----------GLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.947e-12 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 193 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 257
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.947e-12 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPVNNN Sbjct: 130 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 194 The following BLAST results are available for this feature:
BLAST of CK739810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739810 ID=CK739810; Name=CK739810; organism=Citrus sinensis; type=EST; length=529bpback to top |