CK739812 | Citrus Genome Database

Overview


Name	CK739812
Unique Name	CK739812
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	661

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.727e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 138.272 bits (347), Expect = 3.474e-32
Identity = 68/71 (95.77%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.8189 bits (229), Expect = 7.939e-29
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 7.939e-29
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.4337 bits (228), Expect = 1.034e-28
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 1.034e-28
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.479e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.4337 bits (228), Expect = 1.034e-28
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 1.034e-28
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.768e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.502 bits (345), Expect = 5.926e-32
Identity = 68/71 (95.77%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 93.2041 bits (230), Expect = 1.346e-28
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 53.1434 bits (126), Expect = 1.346e-28
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLSDYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.768e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.502 bits (345), Expect = 5.926e-32
Identity = 68/71 (95.77%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 93.2041 bits (230), Expect = 1.346e-28
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 53.1434 bits (126), Expect = 1.346e-28
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLSDYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.276e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 91.6633 bits (226), Expect = 1.753e-28
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 1.753e-28
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.276e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.8189 bits (229), Expect = 1.753e-28
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 53.1434 bits (126), Expect = 1.753e-28
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLSDYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.4337 bits (228), Expect = 2.282e-28
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 53.1434 bits (126), Expect = 2.282e-28
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLSDYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.4337 bits (228), Expect = 2.282e-28
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 53.1434 bits (126), Expect = 2.282e-28
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLSDYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.666e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 92.4337 bits (228), Expect = 2.282e-28
Identity = 46/50 (92.00%), Postives = 47/50 (94.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 53.1434 bits (126), Expect = 2.282e-28
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLSDYNIQKESTLHLVLRL 73

The following BLAST results are available for this feature:

BLAST of CK739812 vs. ExPASy Swiss-Prot

BLAST of CK739812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ACECL	5.727e-35	96.05	Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1	[more]
UBIQ_TRYCR	7.479e-35	97.37	Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1	[more]
UBIQ_ACACA	7.479e-35	97.37	Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1	[more]
UBIQ_GEOCY	9.768e-35	96.05	Ubiquitin OS=Geodia cydonium PE=3 SV=1	[more]
UBIQ_CAEEL	9.768e-35	96.05	Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 ...	[more]
UBIQ_EUPEU	1.276e-34	96.05	Ubiquitin OS=Euplotes eurystomus PE=3 SV=1	[more]
UBIQ_AGLNE	1.276e-34	96.05	Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1	[more]
UBIQ_XENLA	1.666e-34	96.05	Ubiquitin OS=Xenopus laevis PE=1 SV=1	[more]
UBIQ_SPOFR	1.666e-34	96.05	Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1	[more]
UBIQ_RAT	1.666e-34	96.05	Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_6202 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59H10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK739812 ID=CK739812; Name=CK739812; organism=Citrus sinensis; type=EST; length=661bp
AAAACCCTGACCGGTAAGACTATAACTTTGGAGGTTGAAAGCTCTGACAC
GATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTG
ATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTACT
CTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTCG
TCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCACCGGAAAAACAA
TTACTCTTGAGGTTGAAAGTTCTGACACCATTGACAACGTGAAAGCAAAA
ATTCAAGACAAGGAGGGTATCCCACCAGATCAGCAGAGGCTCATTTTTGC
TGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAACATCCAGA
AAGAATCCACTCTTCACTTGGTTCTTCGCCTCCGTGGTGGTATGCAGATT
TTTGTGAAGACACTCACTGGGAAAACCATCACGTTGGAGGTTGAGAGTTC
GGACACAATTGACAATGTGAAGGCTAAGATCCAGGATAAGGAGGGGATTC
CCCCAGACCAGCAGAGGTTGATCTTTGCTGGAAACAACTTGAGGATGGAA
GGACTCTTGCTGATTACAACATCCAGAAGGAGTCCACTCTGCATCTTGTG
CTCCGACTCCG