CK739816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_THEON (Translation initiation factor 6 OS=Thermococcus onnurineus (strain NA1) GN=eif6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12 Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIE---ERLSALGNCIACNDHVALAHTDLDRETEEIIADV 507 +L FENS +GV+ T+ L+ G E L +P+++TSI +RI+G GN N +++P D EL+H++N L + + RIE L+A GN I ND AL RE + + D+ Sbjct: 5 KLDFENSPYLGVYGTATDRVALIREGLGEKKLEVLREVLK--VPLIETSIMKSRIVGVFAAGNSNAIVVPWYIWDAELEHIQNELNELDIDMRIEPFQSTLTAFGNLILANDKAALISVKFTREEAKKLEDI 134
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADV 507 RL FENS +GV+ + T+ L+ G E L +P+++TSI +RI+G GN N +++P D EL+ ++ +L + + V + RL+ALGN I ND AL + RE I ++ Sbjct: 5 RLDFENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFAAGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKEFTREEANAIGEI 134
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_NATPD (Translation initiation factor 6 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif6 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 45/128 (35.16%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIAD 504 R S VGVF+ T+ + LV ES S FE EL + V T+I G+ +G L VGN+NGLL+ TD+E L VV + ++A GN + N+ A H DL R+ I + Sbjct: 3 RAALSGSSYVGVFATATDEYLLVRPDIEESLQSEFETELD--VTAVPTTIAGSGTVGSLAVGNENGLLVTERVTDRERDRLETETGLPVV--ELPGNINAAGNVVLANNEGAFVHPDLSRDALSAIEE 126
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11 Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALAHTDLDRETEEIIADV 507 RL FENS +GVF T+ LV G E L +PV++ SI +RIIG L GN N +L+P D E++ ++++ + + I + +ALGN I ND AL R+ + I D+ Sbjct: 5 RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLATGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAKFSRDEAKEIGDI 134
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_PYRHO (Translation initiation factor 6 OS=Pyrococcus horikoshii GN=eif6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.288e-11 Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADV 507 RL FENS +GVF T+ L+ G E L +PV++ S+ +RIIG L GN N ++LP D E++ ++ +L + + V + +ALGN I ND AL R+ + I ++ Sbjct: 5 RLDFENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLATGNSNAIILPWYVWDAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAALVSAKFSRKEAQEIGEI 134
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_HALWD (Translation initiation factor 6 OS=Haloquadratum walsbyi (strain DSM 16790) GN=eif6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.288e-11 Identity = 44/126 (34.92%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEII 498 R F S VGVF++ T+ L+ + AEL IP V T+IGG+ +G L GN+NG+L+ T +E + + + V V + R++A GN I ND+ A H DL E E I Sbjct: 3 RASFAGSPYVGVFARATDDVLLLRSDVDDDTADAMAAELD--IPAVATTIGGSGTVGALATGNENGILVTSNVTMREKEAIETTA--SVSVTELPGRINAAGNVILANDYGAYVHPDLSTEAVESI 124
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_THEGJ (Translation initiation factor 6 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11 Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADV 507 RL FENS +GV+ T+ ++ G E +T L +P+++TS+ +RI+G GN N L++P D EL + L + + V + RL+A GN I ND AL D RE I D+ Sbjct: 5 RLDFENSPYLGVYGFATDRVAVIREGLGEKKLATLREVLK--VPLIETSVMKSRIVGIFVAGNSNALIVPWYIWDAELDFINAQLREYGIDMEVVPFQSRLTAFGNLILANDKGALVSKDFTREEARKIEDI 134
BLAST of CK739816 vs. ExPASy Swiss-Prot
Match: IF6_PYRFU (Translation initiation factor 6 OS=Pyrococcus furiosus GN=eif6 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11 Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 121 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVV---VQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADV 507 +L FENS +GVF T+ L+ G E L +PVV+ S+ +RIIG L GN N +++P D EL+ ++N+ + + V + + +ALGN I ND AL + RE + I D+ Sbjct: 5 KLDFENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLGAGNSNAIIVPWYVWDSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGALVSSKFSREEAKKIGDI 134 The following BLAST results are available for this feature:
BLAST of CK739816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739816 ID=CK739816; Name=CK739816; organism=Citrus sinensis; type=EST; length=508bpback to top |