CK739825

Overview
NameCK739825
Unique NameCK739825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length547
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.439e-22
Identity = 64/160 (40.00%), Postives = 80/160 (50.00%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAP-ISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFK-RAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGI---XXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDPDPLQD C+ADL+   +S+NG PCKP S                        AVT  DV  +P  NT GVS+ R+D   GG NPPH HPR TE GI                    +S+V+  G  FLIPR L+H    + +T  A+ +  FN+QNP
Sbjct:   23 ASDPDPLQDFCVADLDGKAVSVNGHPCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTE-ASMVVSFNSQNP 181          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.455e-21
Identity = 57/158 (36.08%), Postives = 77/158 (48.73%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA--VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE-AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A DP PLQD C+AD+ +P+ +NGFPCK   NV                 + K    VT  +V  FP +NT G+SL R+D    G+NPPH HPR TE   +                 FSKV+  G VF+ P+A++H    +    PA      ++QNP
Sbjct:   23 AFDPSPLQDFCVADMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNP 180          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.144e-21
Identity = 60/157 (38.22%), Postives = 75/157 (47.77%), Query Frame = 1
Query:   79 RASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            RA DPD LQD+C+AD +    +NGFPCK   N+                      AVT  +V   P +NT  VSL R+D   GG+NPPHTHPR TE                    F+K +  G VF+ PR LVH   K    SPA+ +  FN+Q P
Sbjct:   21 RAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHF-QKNNGKSPASVLSAFNSQLP 176          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 9.330e-21
Identity = 60/156 (38.46%), Postives = 75/156 (48.08%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A+D D LQD+C+AD  + I +NGF CKPASNV                   F   VT  +V   P +NT GVS+ R+D   GG+NPPHTHPR TE                     +K +  G  F+ P+ LVH   K     PAT I  FN+Q P
Sbjct:   20 AADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHF-QKNNGWEPATVIAGFNSQLP 174          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.330e-21
Identity = 58/163 (35.58%), Postives = 75/163 (46.01%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA---VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE-----AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD N+P+ +NGFPCK A +V                    +A   VT  +V     +NT G+S+ R+D    G NPPHTHPR TE      G                  F+K L  G VF+ P+ L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDFCVADRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNP 184          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20
Identity = 60/155 (38.71%), Postives = 75/155 (48.39%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A+D D LQDVC+ADL++ + +NGFPCK  +                    F   VT  +V   P +NT GVSL R+D   GGINPPHTHPR +E                     SK +T G VF+ PR LVH   K     PA  +  FN+Q P
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCK-TNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHF-QKNNGKIPAAVVSAFNSQLP 184          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20
Identity = 56/158 (35.44%), Postives = 75/158 (47.47%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA--VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE-AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A DP PLQD C+AD+ +P+ +NGFPCK    V                 + K    VT  +V  FP +NT G+SL R+D    G+NPPH HPR TE   +                 FSKV+  G  F+ P+A++H    +    PA      N+QNP
Sbjct:   23 AFDPSPLQDFCVADMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNP 180          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20
Identity = 58/163 (35.58%), Postives = 75/163 (46.01%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA---VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE-----AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD+C+AD N+P+ +NGFPCK A +V                    +A   VT  +V     +NT G+S+ R+D    G NPPHTHPR TE      G                  F+K L  G VF+ P  L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNP 184          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.591e-20
Identity = 60/155 (38.71%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A+D D LQDVC+ADL++ + +NGFPCK  +                    F   VT  +V   P +NT GVSL R+D   GGINPPHTHPR +E                     SK +  G VF+ PR LVH      E  PA  I  FN+Q P
Sbjct:   32 AADEDMLQDVCVADLHSKVKVNGFPCK-TNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEV-PAAVISAFNSQLP 184          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.079e-20
Identity = 59/159 (37.11%), Postives = 73/159 (45.91%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFK--RAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+ADLN+P+ +NGF CK   N                    K    VT  +V   P +NT G+S+ RLD    G+NPPHTHPR TE    +                  SKVL  G VF+ P  L+H         PA  I   ++QNP
Sbjct:   24 ASDPSPLQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNP 182          
The following BLAST results are available for this feature:
BLAST of CK739825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
OXO2_HORVU8.439e-2240.00Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GL83_ORYSJ2.455e-2136.08Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH7.144e-2138.22Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
RHRE_PEA9.330e-2138.46Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL122_ORYSJ9.330e-2135.58Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
NEC1_NICPL1.219e-2038.71Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL84_ORYSJ1.219e-2035.44Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL123_ORYSJ1.219e-2035.58Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
NEC1_NICLS1.591e-2038.71Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL82_ORYSJ2.079e-2037.11Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6215 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE60C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739825 ID=CK739825; Name=CK739825; organism=Citrus sinensis; type=EST; length=547bp
ATGATATCTTCTTCCTCAATGTCACTCTTTGGGCTGCTATGCGGCCTGAT
AGTACTACTGATGCTCCCTTTCCCTTCCCGTGCAAGTGACCCTGACCCTT
TACAAGACGTCTGTATTGCGGATTTGAATGCCCCCATCTCTATCAATGGT
TTCCCCTGCAAACCTGCTTCGAACGTAACTTCTGATGATTTCTTCACGGA
TTTTTCTAAAGATCCGACCACATTTGACGTCTTTAAGCGTGCAGTCACAT
TTGGTGATGTTTTTGGCTTTCCGGCGGTCAATACTCAAGGAGTTTCACTC
TTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCTCATACGCATCC
TCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTTGCTCGTAGGTT
TAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGACTCCCGGGATG
GTGTTCTTAATTCCTAGAGCACTGGTTCACCTTCCCACTAAAATGTTGGA
AACGAGCCCGGCCACCTTTATACCTATTTTCAATACTCAAAATCCTG
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