CK739825

Overview
NameCK739825
Unique NameCK739825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length547
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.079e-20
Identity = 62/160 (38.75%), Postives = 79/160 (49.38%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAP-ISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFK-RAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGI---XXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A+DPDPLQD C+ADL+   +S+NG  CKP S                        AVT  DV  +P  NT GVS+ R+D   GG NPPH HPR TE GI                    +S+V+  G  FLIPR L+H    + +T  A+ +  FN+QNP
Sbjct:   23 ATDPDPLQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTE-ASMVVSFNSQNP 181          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.715e-20
Identity = 56/158 (35.44%), Postives = 76/158 (48.10%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA--VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE-AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A DP PLQD C+AD+N+P+ +NGF CK   +V                   K    VT  +V  FP +NT G+SL R+D    G+NPPH HPR TE   +                 FSKV+  G VF+ P+A++H    +    PA      ++QNP
Sbjct:   23 AYDPSPLQDFCVADMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNP 180          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.630e-20
Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = 1
Query:   85 SDPDPLQDVCIADLNAPISINGFPCKP-ASNVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            +D  PLQD+C+ADL A  +++GFPCKP AS V                  F    T   V  FP +NT G+S+ R DL  GG+NPPH+HPR +E  +                 FSKV+    +F++PR L H     +    A+F+ +F++Q+P
Sbjct:   29 ADSPPLQDICVADLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTAANRLFSKVVREKELFVVPRGLQHFQLN-VGAGNASFVAMFDSQSP 182          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.630e-20
Identity = 57/163 (34.97%), Postives = 74/163 (45.40%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA---VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE-----AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A DP PLQD C+AD N+P+ +NGFPCK A +V                    +A   VT  +V     +NT G+S+ R+D    G NPPHTHPR TE      G                  F+K L  G VF+ P+ L+H         PA  I   ++QNP
Sbjct:   22 AFDPSPLQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNP 184          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.048e-20
Identity = 54/160 (33.75%), Postives = 76/160 (47.50%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA---VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A++P PLQD C+ADLN+ + +NGF CK  +NV                    +    +T  +V   P +NT G+S+ R+D    G+NPPHTHPR TE    +                 FSKVL  G VF+ P+ L+H    +    PA      ++QNP
Sbjct:   23 AAEPSPLQDFCVADLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNP 182          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.760e-19
Identity = 60/161 (37.27%), Postives = 73/161 (45.34%), Query Frame = 1
Query:   76 SRASDPDPLQDVCIAD---LNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            S A DPD LQDVC+AD   L  P+ +NGFPCK   NV                       VT   V   P +NT GVS+ R+D    G+NPPHTHPR TE                    F++ +  G VF+ PR LVH   K    +PA  I   N+Q P
Sbjct:   20 SLAGDPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTANKLFTRTVCKGEVFVFPRGLVHF-QKNNGNTPAFAIAALNSQLP 179          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.001e-19
Identity = 60/159 (37.74%), Postives = 77/159 (48.43%), Query Frame = 1
Query:   85 SDPDPLQDVCIADLNAP-ISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFK-RAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGI---XXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            SDPDPLQD C+ADL+   +S+NG  CKP S                        AVT  DV  +P  NT GVS+ R+D   GG NPPH HPR TE G+                    +S+V+  G  F+IPR L+H    + +T  A  +  FN+QNP
Sbjct:    1 SDPDPLQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTE-AYMVVSFNSQNP 158          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18
Identity = 59/161 (36.65%), Postives = 73/161 (45.34%), Query Frame = 1
Query:   76 SRASDPDPLQDVCIAD---LNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            S A DPD LQDVC+AD   L  P+ +NG PCK   NV                       VT   V   P +NT GVS+ R+D    G++PPHTHPR TE                    F++ ++ G VF+ PR LVH       TS A  I  FN+Q P
Sbjct:   20 SLAGDPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTS-ALAIAAFNSQLP 179          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18
Identity = 55/163 (33.74%), Postives = 73/163 (44.79%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA---VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE-----AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD ++P+ +NG PCK A +V                    +A   VT  +V     +NT  +S+ R+D    G NPPHTHPR TE      G                  F+K L  G VF+ P+ L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDFCVADKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNP 184          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.945e-18
Identity = 56/158 (35.44%), Postives = 73/158 (46.20%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD+++P+ +NGF C    +V                       VT  +V   P +NT G+S+ R+D    G NPPHTHPR TE    +                FFSKVL  G VF+ P  L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDFCVADMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNP 179          
The following BLAST results are available for this feature:
BLAST of CK739825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GER2_WHEAT2.079e-2038.75Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL812_ORYSJ2.715e-2035.44Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL12_ORYSJ4.630e-2035.48Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL121_ORYSJ4.630e-2034.97Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL81_ORYSJ6.048e-2033.75Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL13_ORYSJ1.760e-1937.27Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
OXO1_HORVU3.001e-1937.74Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL32_ORYSJ1.141e-1836.65Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL124_ORYSJ1.141e-1833.74Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL811_ORYSJ1.945e-1835.44Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6215 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE60C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739825 ID=CK739825; Name=CK739825; organism=Citrus sinensis; type=EST; length=547bp
ATGATATCTTCTTCCTCAATGTCACTCTTTGGGCTGCTATGCGGCCTGAT
AGTACTACTGATGCTCCCTTTCCCTTCCCGTGCAAGTGACCCTGACCCTT
TACAAGACGTCTGTATTGCGGATTTGAATGCCCCCATCTCTATCAATGGT
TTCCCCTGCAAACCTGCTTCGAACGTAACTTCTGATGATTTCTTCACGGA
TTTTTCTAAAGATCCGACCACATTTGACGTCTTTAAGCGTGCAGTCACAT
TTGGTGATGTTTTTGGCTTTCCGGCGGTCAATACTCAAGGAGTTTCACTC
TTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCTCATACGCATCC
TCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTTGCTCGTAGGTT
TAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGACTCCCGGGATG
GTGTTCTTAATTCCTAGAGCACTGGTTCACCTTCCCACTAAAATGTTGGA
AACGAGCCCGGCCACCTTTATACCTATTTTCAATACTCAAAATCCTG
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