CK739825

Overview
NameCK739825
Unique NameCK739825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length547
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.541e-18
Identity = 55/158 (34.81%), Postives = 72/158 (45.57%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPC-KPASNVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD+++P+ +NGF C  P                          VT  +V   P +NT G+S+ R+D    G NPPHTHPR TE    +                 FSKVL  G VF+ P+ L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDFCVADMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNP 179          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.318e-18
Identity = 61/170 (35.88%), Postives = 79/170 (46.47%), Query Frame = 1
Query:   73 PSRASDPDPLQDVCIAD---LNAPISINGFPCKPASNV---XXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRLD-LDVGGINPPHTHPRGTEA-----GIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            P  A DPD LQD+C+AD   L  P+ +NGFPCKP +NV                        AVT   V   P +NT GVS+ R+D    GG NPPH+HPR TE      G+                  ++V+  G VF+ PR L+H    + E  PA  I  F++Q P
Sbjct:   24 PLLAGDPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGE-KPAVAISAFDSQLP 192          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.660e-18
Identity = 58/160 (36.25%), Postives = 78/160 (48.75%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAP-ISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFK-RAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGI---XXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            +S+P PLQD C+ADL+   +S+NG  CKP S                        AVT  +V  +P  NT GVS+ R+D   GG NPPH HPR TE GI                    +S+V+  G  FLIPR L+H    + +T  A+ +  FN+Q+P
Sbjct:   23 SSNPHPLQDFCVADLDGKAVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTE-ASMVVFFNSQSP 181          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.393e-18
Identity = 55/158 (34.81%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD+++P+ +NGF C     V                       VT  +V   P +NT G+S+ R+D    G NPPHTHPR TE    +                 FSKVL  G VF+ P  L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDFCVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNP 179          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.261e-17
Identity = 55/158 (34.81%), Postives = 70/158 (44.30%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPC-KPASNVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD ++P+ +NGF C  P                          VT  +V   P +NT G+S+ R+D    G NPPHTHPR TE    +                 FSKVL  G VF+ P  L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNP 179          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17
Identity = 55/158 (34.81%), Postives = 70/158 (44.30%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPC-KPASNVXXXXXXXXXXXXXXXXXVFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD ++P+ +NGF C  P                          VT  +V   P +NT G+S+ R+D    G NPPHTHPR TE    +                 FSKVL  G VF+ P  L+H         PA  I   ++QNP
Sbjct:   22 ASDPSPLQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNP 179          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17
Identity = 54/158 (34.18%), Postives = 70/158 (44.30%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD ++P+ +NGF C     V                       VT  +V   P +NT G+S+ R+D    G NPPHTHPR TE    +                 FSKVL  G VF+ P  L+H         PA  +   ++QNP
Sbjct:   23 ASDPSPLQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNP 180          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17
Identity = 55/158 (34.81%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP PLQD C+AD ++P+ +NGF C    +V                       VT  +V   P +NT G+S+ R+D    G NPPHTHPR TE    +                 FSKVL  G VF+ P  L+H         PA  I   ++QNP
Sbjct:   23 ASDPSPLQDFCVADEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNP 180          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17
Identity = 56/158 (35.44%), Postives = 75/158 (47.47%), Query Frame = 1
Query:   82 ASDPDPLQDVCIADLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXXVFKRA-VTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTE--AGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            ASDP  LQD C+ D  + + +NGFPCK A +V                   + + VT  +V   P +NT GVSL R+D    G+NPPHTHPR TE    +                 F+KVL  G VF+ P+ LVH       T+ A  +   ++QNP
Sbjct:   28 ASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNN-GTNNAVALAALSSQNP 184          
BLAST of CK739825 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.378e-16
Identity = 56/160 (35.00%), Postives = 77/160 (48.12%), Query Frame = 1
Query:   82 ASDPDPLQDVCIA----DLNAPISINGFPCKPASNVXXXXXXXXXXXXXXXXX-VFKRAVTFGDVFGFPAVNTQGVSLFRLDLDVGGINPPHTHPRGTEAGIXXXXXXXXXXXXXXXXFFSKVLTPGMVFLIPRALVHLPTKMLETSPATFIPIFNTQNP 546
            A+DP+P+QD C+A       A  +  GFPCKPAS V                   F  ++  G+V  FPA+NT GV++ R+DL  GG+NP H+HPR  E                   ++SKV+  G  F IPR L+H        S A  + +FN+Q P
Sbjct:   34 AADPEPIQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVSTAGKYYSKVVGEGETFAIPRGLMHFQYNPGNAS-ARAMTVFNSQLP 192          
The following BLAST results are available for this feature:
BLAST of CK739825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GL85_ORYSJ2.541e-1834.81Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL14_ORYSJ3.318e-1835.88Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GER3_WHEAT5.660e-1836.25Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL810_ORYSJ7.393e-1834.81Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL88_ORYSJ1.261e-1734.81Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL89_ORYSJ2.809e-1734.81Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ3.669e-1734.18Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ3.669e-1734.81Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL22_ORYSJ3.669e-1735.44Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL37_ORYSJ2.378e-1635.00Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6215 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE60C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739825 ID=CK739825; Name=CK739825; organism=Citrus sinensis; type=EST; length=547bp
ATGATATCTTCTTCCTCAATGTCACTCTTTGGGCTGCTATGCGGCCTGAT
AGTACTACTGATGCTCCCTTTCCCTTCCCGTGCAAGTGACCCTGACCCTT
TACAAGACGTCTGTATTGCGGATTTGAATGCCCCCATCTCTATCAATGGT
TTCCCCTGCAAACCTGCTTCGAACGTAACTTCTGATGATTTCTTCACGGA
TTTTTCTAAAGATCCGACCACATTTGACGTCTTTAAGCGTGCAGTCACAT
TTGGTGATGTTTTTGGCTTTCCGGCGGTCAATACTCAAGGAGTTTCACTC
TTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCTCATACGCATCC
TCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTTGCTCGTAGGTT
TAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGACTCCCGGGATG
GTGTTCTTAATTCCTAGAGCACTGGTTCACCTTCCCACTAAAATGTTGGA
AACGAGCCCGGCCACCTTTATACCTATTTTCAATACTCAAAATCCTG
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