CK739850

Overview
NameCK739850
Unique NameCK739850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1430 contig Csv1_Contig1430:1..639. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: M3K13_MOUSE (Mitogen-activated protein kinase kinase kinase 13 OS=Mus musculus GN=Map3k13 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 50/167 (29.94%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  136 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +KL HPN+  F G                        +   C+++EY   G L + L     +K+  + ++  +  +A G++YLH  KI+HRD+K+ N+L+     +KI+DFG ++ E  +        GT+ +MAPEV+  +P + K D++SFG+ LWE+   ++P
Sbjct:  208 RKLKHPNIIAFKGVCT--------------------QAPCYCIIMEYCAHGQLYEVL--RAGRKITPRLLVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSK-ELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIP 351          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: M3K13_HUMAN (Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 50/167 (29.94%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  136 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +KL HPN+  F G                        +   C+++EY   G L + L     +K+  + ++  +  +A G++YLH  KI+HRD+K+ N+L+     +KI+DFG ++ E  +        GT+ +MAPEV+  +P + K D++SFG+ LWE+   ++P
Sbjct:  209 RKLKHPNIIAFKGVCT--------------------QAPCYCIIMEYCAHGQLYEVL--RAGRKITPRLLVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSK-ELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIP 352          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: M3K13_BOVIN (Mitogen-activated protein kinase kinase kinase 13 OS=Bos taurus GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 50/167 (29.94%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  136 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +KL HPN+  F G                        +   C+++EY   G L + L     +K+  + ++  +  +A G++YLH  KI+HRD+K+ N+L+     +KI+DFG ++ E  +        GT+ +MAPEV+  +P + K D++SFG+ LWE+   ++P
Sbjct:  209 RKLKHPNIIAFKGVCT--------------------QAPCYCIIMEYCAHGQLYEVL--RAGRKITPRLLVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSK-ELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIP 352          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 1
Query:  130 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLH--SKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGET--GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +  +L HPN+ +F+G                    N+ P     +V+EY+P G+L + L  +    L +  +  +ALD+A+G++YLH     ++HRD+K+ N+L+D +  +KI+DFG++    ++    T  T  GT  + APEVL   PY  K DV+SF I LWEI   + P
Sbjct:  540 IMSQLRHPNICQFLGTC------------------NNPPE--ILIVMEYMPLGSLYRIL-HDPSISLDWPRMKSMALDIAKGMNYLHCCDPIVIHRDLKSHNLLVDEHYRVKISDFGLSTRFKKHLDKKTAMTPVGTPCWTAPEVLRNDPYTEKADVFSFAIVLWEIVTREDP 691          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: ARKA_DICDI (Ankyrin repeat-containing protein kinase A OS=Dictyostelium discoideum GN=arkA PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 1
Query:  259 CVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSK--KIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCC 627
            C+V+EY   G++   + +N      F   +Q    +  G++ LH    +++HRD+KT N L++ N  +K+ADFG++R   ++ ++   +T GT  Y APEV +GK YN + D+YS GI +WEI  C
Sbjct: 1181 CLVMEYCSNGSIYHSIRKNPPSWERFFSFVQ---QMLAGINALHQSTPQVLHRDIKTLNFLVNHNNKVKVADFGLSRFNTESNQETLNKTRGTSVYCAPEVFEGKEYNERSDMYSMGIVMWEIVYC 1303          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: 7TMK1_DICDI (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.875e-18
Identity = 66/182 (36.26%), Postives = 94/182 (51.65%), Query Frame = 1
Query:  112 FGKRWPVWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVI---QIALDLARGLSYLHSKK---IVHRDVKTENMLLDANRTL-KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            F K   +   L HPNV +F+G     TNL                     +V EY+ GG+L + L    R  L  +  I    +A+ +ARG+ YLH  K   I+HRD+ T+N+LLD + T+ K+ADFG+++ +     +MT   G L Y APEV  G+ Y  K DVYSFG+ +W I   + P
Sbjct:  409 FLKEVAILSILRHPNVLQFLGVC-SETNLN-------------------GIVTEYMGGGSLDRLL--TDRYFLIKQNPILAWNMAISIARGMFYLHDWKPNPILHRDLSTKNILLDESLTIAKVADFGLSKEQGF---EMTSTVGHLCYQAPEVFIGELYTPKADVYSFGLLVWCIITGEQP 565          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 1
Query:  262 VVVEYLPGGTLKKFLIR-NKRKKLAFKGVIQIALDLARGLSYLHS---KKIVHRDVKTENMLLDANRTLKIADFGVARV--EAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 624
            +V EY+  GTLK  L   + + +L+++  ++I +  ARGL YLH+   + I+HRDVK+ N+LLD N   K+ADFG+++   +       T   G+ GY+ PE L  +    K DVYSFG+ + E+ C
Sbjct:  558 IVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVC 684          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 1
Query:  130 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK-RKKLAFKGVIQIALDLARGLSYLHSKK---IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM-TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            V  +++H NV K +G  + T   ++P                  +V E++  GTL   L  +     L ++  +++A+++A  L+YLHS     I+HRD+KT N+LLD N T K+ADFG +R+   +  D+ T   GTLGY+ PE  +    N K DVYSFG+ L E+
Sbjct:  457 VLSQINHRNVVKLLGCCLET---EVP-----------------LLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMEL 604          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 1
Query:  130 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNK-RKKLAFKGVIQIALDLARGLSYLHSKK---IVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDM-TGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            V  +++H NV K +G  + T   ++P                  +V E++  GTL   L  +     L ++  ++IA+++A  L+YLHS     I+HRD+KT N+LLD N T K+ADFG +R+   +  ++ T   GTLGY+ PE  +    N K DVYSFG+ L E+
Sbjct:  456 VLSQINHRNVVKLLGCCLET---EVP-----------------LLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMEL 603          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: NEK4_MOUSE (Serine/threonine-protein kinase Nek4 OS=Mus musculus GN=Nek4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 1
Query:  262 VVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            +V+ +  GG L + L   K + L    V++  + +A  L YLH K I+HRD+KT+N+ L     +K+ D G+ARV  +N  DM     GT  YM+PE+   KPYN K DV++ G C++E+
Sbjct:   81 IVMGFCEGGDLYRKLKEQKGQLLPESQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARV-LENHGDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEM 199          
The following BLAST results are available for this feature:
BLAST of CK739850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K13_MOUSE7.875e-1829.94Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_HUMAN7.875e-1829.94Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K13_BOVIN7.875e-1829.94Mitogen-activated protein kinase kinase kinase 13 ... [more]
DRKC_DICDI7.875e-1833.53Probable serine/threonine-protein kinase drkC OS=D... [more]
ARKA_DICDI7.875e-1836.51Ankyrin repeat-containing protein kinase A OS=Dict... [more]
7TMK1_DICDI7.875e-1836.26Seven transmembrane domain-containing tyrosine-pro... [more]
Y2393_ARATH1.028e-1738.58Probable receptor-like protein kinase At2g39360 OS... [more]
WAK4_ARATH1.028e-1735.12Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
WAK1_ARATH1.028e-1735.12Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
NEK4_MOUSE1.028e-1739.17Serine/threonine-protein kinase Nek4 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6240 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739850 ID=CK739850; Name=CK739850; organism=Citrus sinensis; type=EST; length=639bp
GGACTGTGTACCGCGGCGCATATGATGGCCAAGATGTTGCAGTGAAGATA
TTGGATTGGGCGGAGGATGGGATGGTCACATCTGCTGAAGCTGCTGCAAT
TCGGGCATCATTTCGGCAAGAGGTGGCCTGTTTGGCAAAAGCTTGACCAT
CCAAACGTAACCAAATTTATTGGAGCTTCAATGGGAACAACCAATCTTAA
GATTCCTTCCCAAAGTGCTACGAGTGACAGCCATAATTCTCTTCCTTCCA
GGGCTTGCTGTGTTGTTGTTGAATACCTTCCAGGCGGGACATTGAAGAAA
TTTTTGATCAGGAACAAGAGGAAAAAACTTGCCTTTAAGGGTGTGATTCA
AATTGCTTTGGATCTTGCTAGAGGATTGAGCTATCTTCACTCAAAAAAGA
TTGTACATCGTGATGTTAAGACAGAAAACATGTTGCTAGATGCTAACAGA
ACTTTGAAAATTGCTGATTTTGGTGTTGCTCGAGTTGAAGCTCAGAATCC
AAGGGACATGACTGGGGAAACAGGAACTCTTGGGTACATGGCCCCAGAGG
TACTGGATGGGAAGCCTTACAATAGGAAATGCGATGTCTATAGCTTTGGG
ATATGCCTATGGGAAATCTACTGCTGCGATATGCCTTTA
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