CK739852

Overview
NameCK739852
Unique NameCK739852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19
Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 1
Query:  322 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            +YRGVR+RPWGKFAAEIRD  +NG R+WLGT+++ E AALAYD+AAF MRGS A LNF
Sbjct:   81 SYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNF 138          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19
Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 1
Query:  187 TVKEGGIS--FDQLDGKSTPHAPPQAQASGFRLQKAATMTREIHVRVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            T+ E  +S    +L G+  P +    Q+S   LQ+ +   +      NYRGVR+RPWGK+AAEIRD  K  +R+WLGT+DT E AALAYD+AAF+ RG KAKLNF
Sbjct:   28 TLSESDVSDFVSELTGQPIPSSIDD-QSSSLTLQEKSNSRQR-----NYRGVRQRPWGKWAAEIRDPNK-AARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF 125          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.189e-18
Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 1
Query:  322 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            +YRGVR+RPWGKFAAEIRD  K GSR+WLGT+DT   AA AYD AAF++RGSKA LNF
Sbjct:  155 HYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNF 212          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 1
Query:  325 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            YRGVR+RPWGK+AAEIRD +K+G R+WLGT+DT E AA AYDRAA+ MRG  A LNF
Sbjct:   20 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNF 76          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18
Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 1
Query:  322 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            +YRGVR+RPWGKFAAEIRD  + G+R+WLGT+DT   AA AYDRAAFK+RGSKA +NF
Sbjct:  144 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNF 201          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.649e-18
Identity = 41/59 (69.49%), Postives = 50/59 (84.75%), Query Frame = 1
Query:  319 VNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            + YRGVRKRPWGK+AAEIRD  ++G+R+WLGT++T E AA AYDRAAF MRG +A LNF
Sbjct:   12 MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNF 70          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.459e-18
Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 1
Query:  322 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            +YRGVRKRPWGKFAAEIRD  +NG R+WLGT+D  E AALAYD+AAF  +GS A LNF
Sbjct:   85 SYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNF 142          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.459e-18
Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 1
Query:  322 NYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            +YRGVR+RPWGKFAAEIRD  + G+R+WLGT+DT   AA AYDRAA+K+RGSKA +NF
Sbjct:  137 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNF 194          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.518e-18
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 1
Query:  316 RVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            +  +RGVR+RPWGKFAAEIRD  +NG+RLWLGT++T E AA AYDRAAF +RG  A LNF
Sbjct:   17 QARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNF 76          
BLAST of CK739852 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.901e-18
Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 1
Query:  325 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNF 495
            YRGVR+RPWGK+AAEIRD +K+G R+WLGT+DT E AA AYD+AA+ MRG  A LNF
Sbjct:   15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNF 71          
The following BLAST results are available for this feature:
BLAST of CK739852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
ERF92_ARATH9.104e-1972.41Ethylene-responsive transcription factor 1B OS=Ara... [more]
EF112_ARATH9.104e-1950.48Ethylene-responsive transcription factor ERF112 OS... [more]
EF102_ARATH1.189e-1874.14Ethylene-responsive transcription factor 5 OS=Arab... [more]
ERF97_ARATH1.553e-1871.93Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF5_TOBAC1.553e-1872.41Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF95_ARATH2.649e-1869.49Ethylene-responsive transcription factor ERF095 OS... [more]
ERF93_ARATH3.459e-1872.41Ethylene-responsive transcription factor 15 OS=Ara... [more]
ERF5_NICSY3.459e-1870.69Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF98_ARATH4.518e-1868.33Ethylene-responsive transcription factor ERF098 OS... [more]
ERF96_ARATH5.901e-1870.18Ethylene-responsive transcription factor ERF096 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6242 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739852 ID=CK739852; Name=CK739852; organism=Citrus sinensis; type=EST; length=496bp
CTCAAATCCAAGAAAACACAGCAAAATCATAACATCATATTCCCCGGGCA
AATTAAATTCAAGCTTAACTTTTCGTTTACAGATTAAAGTTTTCAGCGTT
CAGTGATACACATAAACTCTTGAACTCAAGCCCTAACTCTGATTCAATCC
ATTGAAATATGGAGGATTGCGAAGCTTTTACACGACACTGTTAAGGAGGG
GGGGATTTCGTTTGATCAGCTTGATGGAAAGTCGACGCCTCATGCTCCGC
CTCAGGCTCAGGCTAGTGGATTTCGTTTACAGAAGGCAGCCACGATGACA
CGTGAGATTCACGTGCGTGTAAATTATCGAGGTGTGAGGAAAAGGCCGTG
GGGAAAGTTTGCTGCGGAGATAAGGGATCGTAAAAAGAATGGCTCACGAC
TTTGGCTGGGGACCTATGATACCCCTGAGGGTGCTGCGTTGGCTTATGAT
AGAGCCGCTTTCAAGATGCGCGGCTCAAAAGCCAAGCTTAATTTTC
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