CK739853

Overview
NameCK739853
Unique NameCK739853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length290
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: BSAA_STAAR (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MRSA252) GN=bsaA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.526e-22
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 2
Query:    8 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            S +  L  LY+KYK+QG  IL FPCNQFG QEPG  E+  +     +   FP+  K+DV G++  PL+++L +++ G F + IKWNF+KFLVD+
Sbjct:   40 SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDR 133          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: BSAA_STAAN (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain N315) GN=bsaA PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.526e-22
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 2
Query:    8 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            S +  L  LY+KYK+QG  IL FPCNQFG QEPG  E+  +     +   FP+  K+DV G++  PL+++L +++ G F + IKWNF+KFLVD+
Sbjct:   40 SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDR 133          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: BSAA_STAAM (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=bsaA PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.526e-22
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 2
Query:    8 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            S +  L  LY+KYK+QG  IL FPCNQFG QEPG  E+  +     +   FP+  K+DV G++  PL+++L +++ G F + IKWNF+KFLVD+
Sbjct:   40 SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDR 133          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: BSAA_STAAC (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain COL) GN=bsaA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.526e-22
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 2
Query:    8 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            S +  L  LY+KYK+QG  IL FPCNQFG QEPG  E+  +     +   FP+  K+DV G++  PL+++L +++ G F + IKWNF+KFLVD+
Sbjct:   40 SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDR 133          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: GPX1_SCHMA (Glutathione peroxidase OS=Schistosoma mansoni GN=GPX1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.309e-22
Identity = 46/96 (47.92%), Postives = 66/96 (68.75%), Query Frame = 2
Query:    2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            T+ NY +L +++ +   +GL ILAFPCNQFG QEP    +I++F   ++  +F +F K+ VNG +A  LYK LKS + G   ++IKWNFSKFLVD+
Sbjct:   46 TDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDR 141          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: GPO_LACLM (Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.637e-21
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 2
Query:   23 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            L +LY+ YK+QGLEIL FPCNQF  Q+ G+N +I EF    +   F +F K+ VNG  A PLY+ LK    G    +IKWNF+KFL+D+
Sbjct:   44 LEKLYETYKDQGLEILGFPCNQFANQDAGENTEINEFCQLNYGVTFTMFQKIKVNGKEAHPLYQFLKKEAKGALSGTIKWNFTKFLIDR 132          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: GPO_SYNY3 (Putative glutathione peroxidase OS=Synechocystis sp. (strain PCC 6803) GN=slr1171 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.793e-21
Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLF------GDSIKWNFSKFLVDK 289
            Y  L  LY+++ ++G  +L FPCNQFG QEPG + +I+ F  TR+   FP+F+KV+VNG NA PL+K L ++  G+        + IKWNF+KFLVD+
Sbjct:   47 YQGLQALYNRFGDRGFTVLGFPCNQFGQQEPGGSGEIKNFCETRYGVTFPLFEKVEVNGPNAHPLFKFLTAASPGMAIPFLGGAEDIKWNFTKFLVDR 144          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: BSAA_STAES (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=bsaA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.764e-21
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 2
Query:   23 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            L +LYD+YK+Q   IL FPCNQFG QEPG  E+  +     +   FPI +KVDV GDN  PL+  L ++  G+  + IKWNF+KFL+D+
Sbjct:   45 LQKLYDEYKDQRFIILGFPCNQFGGQEPGSGEEAAQNCKINYGVTFPIHEKVDVKGDNQHPLFHFLTNAAKGMINEKIKWNFTKFLIDR 133          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: BSAA_STAEQ (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=bsaA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.061e-20
Identity = 47/95 (49.47%), Postives = 60/95 (63.16%), Query Frame = 2
Query:    5 NSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDK 289
            N  + +L  LY KY   GLEIL+FPCN F  QEPG  + I      +F   FPI  K++VNG++  PLY  LK  + GLFG  IKWNF+KF+VD+
Sbjct:   38 NDQFNKLEMLYKKYHKYGLEILSFPCNDFNNQEPGLIKDIYRVYKYKFGITFPIHAKINVNGEHEHPLYTLLKCKQPGLFGSQIKWNFTKFVVDQ 132          
BLAST of CK739853 vs. ExPASy Swiss-Prot
Match: GPX1_YEAST (Glutathione peroxidase 1 OS=Saccharomyces cerevisiae GN=GPX1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.297e-18
Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 2
Query:   14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFG-DSIKWNFSKFLVDK 289
            Y EL  LY+KYK+ GL I+AFPC QFG QE   +++I +F   ++   FPI  K+  NG    P+YK LK+S  G  G   IKWNF KF+VD+
Sbjct:   42 YKELEYLYEKYKSHGLVIVAFPCGQFGNQEFEKDKEINKFCQDKYGVTFPILHKIRCNGQKQDPVYKFLKNSVSGKSGIKMIKWNFEKFVVDR 134          
The following BLAST results are available for this feature:
BLAST of CK739853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
BSAA_STAAR2.526e-2246.81Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAN2.526e-2246.81Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAM2.526e-2246.81Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAC2.526e-2246.81Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
GPX1_SCHMA4.309e-2247.92Glutathione peroxidase OS=Schistosoma mansoni GN=G... [more]
GPO_LACLM1.637e-2150.56Glutathione peroxidase OS=Lactococcus lactis subsp... [more]
GPO_SYNY32.793e-2146.94Putative glutathione peroxidase OS=Synechocystis s... [more]
BSAA_STAES4.764e-2149.44Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAEQ1.061e-2049.47Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
GPX1_YEAST1.297e-1848.39Glutathione peroxidase 1 OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6243 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739853 ID=CK739853; Name=CK739853; organism=Citrus sinensis; type=EST; length=290bp
GACCAATTCAAACTACACTGAGCTGAGTCAGTTGTACGACAAGTACAAGA
ATCAAGGCTTGGAGATTCTGGCCTTTCCTTGTAATCAGTTTGGAGCTCAA
GAGCCAGGAGACAATGAACAGATTCAAGAATTTGCATGCACTCGCTTTAA
GGCTGAGTTTCCCATATTTGATAAGGTTGATGTTAATGGTGATAATGCTG
CTCCTTTATACAAGCATCTGAAATCCAGCAAAGGTGGACTTTTTGGAGAC
AGCATCAAGTGGAACTTTTCCAAGTTCTTGGTGGATAAGG
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