CK739855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_CLOBM (Aminomethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gcvT PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.484e-28 Identity = 77/167 (46.11%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 39 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF-RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 T NE+GG IDD ++ K +D +LV+NA +DKD+ I H F + DVS D + LALQGPLA +LQ + DL ++ F + R + ++G C ++RTGYTGEDGFEI E A L AIL K EG + GLGARD+LR EA L LYGN+M+ Sbjct: 87 TFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIADVS----DSIAQLALQGPLAEEILQKIVDVDLQEIKFFKLRRDVLVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEG-AQPIGLGARDTLRFEASLLLYGNEMD 248
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_ALKMQ (Aminomethyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=gcvT PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.484e-28 Identity = 77/160 (48.12%), Postives = 107/160 (66.88%), Query Frame = 3 Query: 54 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF-RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE-KSEGKVRLTGLGARDSLRLEAGLCLYGNDM 527 ENGG +DD ++ K ++D+ YLV+NAG +KD E +K TA +V+ +I ++ S LALQGP A +LQ LT+ DLS+L F R + I+GV+C ++RTGYTGEDGFEI V AV L + +LE E ++ GLGARD+LR EA L LYG+++ Sbjct: 92 ENGGVVDDLLVYKFEEDYFYLVINAGNIEKDY---EWMLKQSTAYDVEVN-NISNDVSELALQGPKAEKILQKLTETDLSQLQFFYLQRDVTIDGVNCLISRTGYTGEDGFEIYVNPSDAVQLWEKLLEVGQEDGLKPIGLGARDTLRFEAALPLYGHEI 247
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_CLOB1 (Aminomethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gcvT PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.531e-28 Identity = 77/167 (46.11%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 39 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF-RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 T NE+GG IDD ++ K +D +LV+NA +DKD+ I H F + DVS D + LA QGPLA +LQ + DL ++ F + R + +NG C ++RTGYTGEDGFEI E A L AIL K EG + GLGARD+LR EA L LYGN+M+ Sbjct: 87 TFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIVDVS----DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEG-AQPIGLGARDTLRFEASLLLYGNEMD 248
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_CLOB6 (Aminomethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gcvT PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.305e-28 Identity = 77/167 (46.11%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 39 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF-RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 T NE+GG IDD ++ K +D +LV+NA +DKD+ I H F + DVS D + LA QGPLA +LQ + DL ++ F + R + +NG C ++RTGYTGEDGFEI E A L AIL K EG + GLGARD+LR EA L LYGN+M+ Sbjct: 87 TFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWILDHKGDFDVEIVDVS----DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEG-AQPIGLGARDTLRFEASLLLYGNEMD 248
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_THESQ (Aminomethyltransferase OS=Thermotoga sp. (strain RQ2) GN=gcvT PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.317e-28 Identity = 73/177 (41.24%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 9 AGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVP---SERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 + L G +V NENGG IDD V+ KV D +VVNA +KD I++H K+F + ++S D +L+A QGP A LQ L +D L ++ + F+ + GV ++RTGYTGEDGFE+ + S + D +L K +G R GLGARD RLEA LYG DM+ Sbjct: 74 SSLPDGKALYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFNVEVSNIS----DTTALIAFQGPRAQEALQELVEDSLEEIAYYSFKKSIVAGVEAIVSRTGYTGEDGFELMIEAKNSPKVWDALMNLLRKIDG--RPAGLGARDVCRLEATYLLYGQDMD 244
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_CLOBJ (Aminomethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gcvT PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.317e-28 Identity = 76/167 (45.51%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 39 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF-RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 T NE+GG IDD ++ K +D +LV+NA +DKD+ I H F + DVS D + LA QGPLA +LQ + DL ++ F + R + ++G C ++RTGYTGEDGFEI E A +L AIL K EG + GLGARD+LR EA L LYGN+M+ Sbjct: 87 TFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIVDVS----DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVDGKKCLVSRTGYTGEDGFEIYCKPEDAKELWHAILNAGKEEG-AQPIGLGARDTLRFEASLLLYGNEMD 248
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_THEP1 (Aminomethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=gcvT PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.638e-28 Identity = 75/179 (41.90%), Postives = 102/179 (56.98%), Query Frame = 3 Query: 3 DVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAV---DLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 D + L G +V NENGG IDD V+ KV D +VVNA +KD I++H K+F + ++S D +L+A QGP A LQ L +D L ++ + FR + GV ++RTGYTGEDGFE+ + ++ A D +L K +G R GLGARD RLEA LYG DM+ Sbjct: 72 DFSSLPDGKAIYSVMCNENGGIIDDLVVYKVSPDEALMVVNAANIEKDFNWIKSHSKNFDVEILNIS----DTTALIAFQGPEAQETLQELVEDSLEEIAYYSFRKSIVAGVEALVSRTGYTGEDGFELMLEAKDAPKVWDALMNLLRKIDG--RPAGLGARDVCRLEATYLLYGQDMD 244
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_CLOBK (Aminomethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=gcvT PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.638e-28 Identity = 77/167 (46.11%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 39 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF-RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 T NE+GG IDD ++ K ++ +LV+NA +DKD+ I H F + D S D + LALQGPLA +LQ + DL ++ F + R + +NG C ++RTGYTGEDGFEI E A L AIL K EG V+ GLGARD+LR EA L LYGN+M+ Sbjct: 87 TFMCNEDGGVIDDLLVYKFAENEFFLVINASNKDKDVKWIMDHKGDFDVEIVDES----DSIAQLALQGPLAEEILQKIVDIDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEG-VQPIGLGARDTLRFEASLLLYGNEMD 248
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_THETN (Aminomethyltransferase OS=Thermoanaerobacter tengcongensis GN=gcvT PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 9.617e-28 Identity = 76/177 (42.94%), Postives = 109/177 (61.58%), Query Frame = 3 Query: 3 DVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRI-LDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEG-KVRLTGLGARDSLRLEAGLCLYGNDM 527 D++ L T N NGG IDD ++ K +++ LVVNA +KD + + + + +VS D+ + LA+QGP A +LQ LT +DLS++ F F+ + I GV C ++RTGYTGEDGFEI +P+E AV L + ILE + ++ GLGARD+LR EAGL LYGN++ Sbjct: 81 DLSKLNDNQVLYTFMCNHNGGVIDDLLVYKYSNNYYLLVVNAANIEKDYKWMLNNAGIYKVEIENVS----DKIAELAIQGPKAEEILQKLTDEDLSQIKFFYFKDKVKIAGVECLVSRTGYTGEDGFEIYMPNEHAVTLWEKILEAGKDYGLKPAGLGARDTLRFEAGLPLYGNEL 253
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_CLOBL (Aminomethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gcvT PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.256e-27 Identity = 76/167 (45.51%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 39 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF-RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 T NE+GG IDD ++ K D +LV+NA +DKD+ I H F + DVS D + LA QGPLA +LQ + DL ++ F + R + ++G C ++RTGYTGEDGFEI E A L AIL K EG + GLGARD+LR EA L LYGN+M+ Sbjct: 87 TFMCNEDGGVIDDLLVYKFAGDEFFLVINASNKDKDVKWIMGHKGDFDVEIVDVS----DSIAQLAFQGPLAEEILQKIVDVDLQEIKFFKLKRDVLVDGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNAGKEEG-AQPIGLGARDTLRFEASLLLYGNEMD 248 The following BLAST results are available for this feature:
BLAST of CK739855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739855 ID=CK739855; Name=CK739855; organism=Citrus sinensis; type=EST; length=531bpback to top |