CK739855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_HALS3 (Probable aminomethyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13 Identity = 57/183 (31.15%), Postives = 86/183 (46.99%), Query Frame = 3 Query: 3 DVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH---IYLVVNAG----CRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDME 530 DV+ L PG T+++G IDD+V+ + D V NAG D+ H +AH + ++ + ++A+QGP A ++ D + L E + + GV C + TGYTGE G EI P+ D A A+ + + GLGARD+LR+E G L G D + Sbjct: 74 DVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPGAFLFVPNAGHDAAAFDRWTDHRDAHDLDASVD------NVTTDYGMVAVQGPDAPDLVAARAGDGVHDLGRFEAATVGVAGVECLVANTGYTGEAGVEIVFPA----DGAGAVWDAIANDCQPCGLGARDTLRMEHGFLLSGQDFD 246
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_AERPE (Probable aminomethyltransferase OS=Aeropyrum pernix GN=gcvT PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.141e-12 Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 39 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER-SLLALQGPLAAPVLQHLTKDDLSKLYFGEFRI-LDINGVSCFL-TRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGND 524 T+ NE DD + ++ ++ +V NA D L + + S G +VS ER +LLALQGP AA V++ + DL L +FR I GV+ ++ +R+G+TGEDGFEI E A + KA +E + G+ ARD+LR+EAG L G++ Sbjct: 87 TLALNEYARVKDDEMPYRLGEEEWLIVPNAAVADAMLEYFSSIASSM---GLNVSIRDLRERYALLALQGPGAARVMEEMGGGDLLDLKPLQFRENAGIAGVTAYIVSRSGWTGEDGFEIIAEVEAAKRIFKAAVEAG---AKPAGIAARDTLRIEAGFVLGGHE 245
BLAST of CK739855 vs. ExPASy Swiss-Prot
Match: GCST_FRAAA (Aminomethyltransferase OS=Frankia alni (strain ACN14a) GN=gcvT PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.795e-11 Identity = 56/176 (31.82%), Postives = 78/176 (44.32%), Query Frame = 3 Query: 3 DVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEG-KVRLTGLGARDSLRLEAGLCLYGNDM 527 D+ +APG T+ N+ GG +DD + + + LV NA + +A + A A G H +LA+QGP AAP L Y F G + R+GYTGE G+E+ + L A+ EG GLGARD+LR E G L+G D+ Sbjct: 77 DLGRIAPGQAQYTLCCNDEGGVVDDLIAYLFSGERVLLVPNAANNAEVVARLAA-----AAPAGVSVTDRHTGFGVLAVQGP-AAPTLVAALGLPTDGAYM-SFVEAAWKGRPVIVCRSGYTGERGYELLPRWDDTPALWDALFAAGEGLGASPVGLGARDTLRTEMGYPLHGQDL 245 The following BLAST results are available for this feature:
BLAST of CK739855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739855 ID=CK739855; Name=CK739855; organism=Citrus sinensis; type=EST; length=531bpback to top |