CK739856

Overview
NameCK739856
Unique NameCK739856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length408
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACWK (2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.764e-11
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  V +A V+   DE  GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELRK+
Sbjct:  396 IEEVLLSHPAVVEAGVVGMADESWGQVPAAFVVKS--GDVTEEEIIRFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRKL 477          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.764e-11
Identity = 32/84 (38.10%), Postives = 56/84 (66.67%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+    ++ E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  397 IEEVLLSHPAVAEAGVVGMSDDKWGQVPAAFVVKS--GAVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  396 IEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVKS--GEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 477          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11
Identity = 32/84 (38.10%), Postives = 56/84 (66.67%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P+AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  396 IEEVLLSHPAVAEAGVVGMTDDKWGQVPVAFVVKS--GEVTEEEIIHFCEAKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 477          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  397 IEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKS--GEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  396 IEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKS--GEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 477          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACAH (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=menE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  397 IEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKS--GEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACAC (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=menE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  397 IEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKS--GEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACAA (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248) GN=menE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.528e-11
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  397 IEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKS--GEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CK739856 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 LEHLLLSHREVADAAVIPYPDEEAGQMPMAFVVRQPHSSLNEAEIMEFVARQVSPYKKIRRVAFINAIPKSAAGKILRMELRKV 252
            +E +LLSH  VA+A V+   D++ GQ+P AFVV+     + E EI+ F   +++ YK  ++  F+  +P++A+ K+LR ELR++
Sbjct:  397 IEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKS--GEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
The following BLAST results are available for this feature:
BLAST of CK739856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
MENE_BACWK5.764e-1139.292-succinylbenzoate--CoA ligase OS=Bacillus weihens... [more]
MENE_BACCR5.764e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCQ7.528e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC17.528e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC07.528e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACAN7.528e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAH7.528e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACAC7.528e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAA7.528e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACHK9.832e-1138.102-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6247 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739856 ID=CK739856; Name=CK739856; organism=Citrus sinensis; type=EST; length=408bp
CTAGAACACTTGCTTCTGTCCCATCGGGAGGTTGCTGATGCTGCAGTTAT
TCCATATCCTGATGAAGAAGCTGGTCAGATGCCCATGGCTTTTGTGGTAA
GGCAGCCGCACAGCAGTCTCAACGAAGCAGAAATAATGGAATTTGTGGCA
AGACAGGTGTCACCGTACAAGAAAATAAGGCGCGTAGCTTTCATCAATGC
TATACCTAAAAGTGCTGCTGGCAAAATATTGAGGATGGAGTTGAGGAAGG
TTGCTGTTCCATCTGGGTCTTCTTGTAGATTGTGATCTTTATAATGGCTG
TATACTTTAGCTTGTTTCCAATGTGAATTTCAGTGTAACTTTTTATTTTA
TTTATAAGAGGACATGCAAGGGGCAAATTTTGAAGTGTAAAAAAAAAAAA
AAAAAAAA
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