CK739857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 4.748e-11 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 2 Query: 119 KLHATCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259 K TCLK AA +I ++ N A G+P C V+IPYKIS STDCS V+ Sbjct: 68 KTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114 HSP 2 Score: 30.8018 bits (68), Expect = 4.748e-11 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 3 Query: 3 TGSLAPCIVYLRSGGPIPVPCCNGVR 80 T LAPC+ YL+ GP+ CC GV+ Sbjct: 31 TAGLAPCLPYLQGRGPLG-GCCGGVK 55
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 43.8986 bits (102), Expect = 6.165e-11 Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 2 Query: 134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 256 CLK + +N NNA LP CG+SI YKI+ + DCSK+ Sbjct: 75 CLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115 HSP 2 Score: 42.3578 bits (98), Expect = 6.165e-11 Identity = 16/26 (61.54%), Postives = 18/26 (69.23%), Query Frame = 3 Query: 3 TGSLAPCIVYLRSGGPIPVPCCNGVR 80 T L PC YL +GGP+P CCNGVR Sbjct: 32 TSGLVPCFGYLAAGGPVPPACCNGVR 57
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 50.8322 bits (120), Expect = 7.986e-11 Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 2 Query: 134 CLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259 CL+ AA ++ P LN A GLP AC V+IPYKIS ST+C+ VR Sbjct: 76 CLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118 HSP 2 Score: 35.039 bits (79), Expect = 7.986e-11 Identity = 14/24 (58.33%), Postives = 16/24 (66.67%), Query Frame = 3 Query: 6 GSLAPCIVYLRSGGPIPVPCCNGV 77 G+LA CI YL G P+ CCNGV Sbjct: 34 GNLAGCIAYLTRGAPLTQGCCNGV 57
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 47.3654 bits (111), Expect = 8.393e-11 Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 256 CL A+ +I +N A GLP CGVSIPYKIS ST+C +V Sbjct: 50 CLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90 HSP 2 Score: 38.5058 bits (88), Expect = 8.393e-11 Identity = 14/23 (60.87%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 12 LAPCIVYLRSGGPIPVPCCNGVR 80 +A CI YLR GP+P CCNGV+ Sbjct: 10 MASCINYLRGAGPLPAACCNGVK 32 The following BLAST results are available for this feature:
BLAST of CK739857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739857 ID=CK739857; Name=CK739857; organism=Citrus sinensis; type=EST; length=407bpback to top |