CK739867

Overview
NameCK739867
Unique NameCK739867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11433 contig Csv1_Contig11433:1163..1636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 8.824e-34
Identity = 69/147 (46.94%), Postives = 100/147 (68.03%), Query Frame = 3
Query:    3 LVYLQAIIKETMRLYPAGPLLLPHESIEECIVNGYLVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTP---SDEPVDMGEAMGLTIAKATPLEVL 434
            L Y+QA++KE +RL+P  PLL+P ++I++    GY +P GTQ+ VNAW I RDP  W+ P +F+PERFL     +DV GQ++ELIPFG+GRRMC  +  G ++M     SL+H FD+  P   S + ++M E+MG+T  K  PL+V+
Sbjct:  319 LPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFL--ESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVI 463          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.153e-33
Identity = 64/152 (42.11%), Postives = 98/152 (64.47%), Query Frame = 3
Query:    3 LVYLQAIIKETMRLYPAGPLLLPHESIEECIVNGYLVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTPS---DEPVDMGEAMGLTIAKATPLEVLVSPRL 449
            L YLQA++KE++RL+P  PL+LPH++     + GY +P G  + VN W + RDP VW  P +++PERFL   ++ID+ G DF ++PFG+GRR+CP    G+ ++  M+  L+H F+++ P     E V+M E+ GL     TPL+ +  PRL
Sbjct:  350 LPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFL--EENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAVAKPRL 499          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.966e-33
Identity = 73/149 (48.99%), Postives = 98/149 (65.77%), Query Frame = 3
Query:    9 YLQAIIKETMRLYPAGPLLLPHESIEECIVNGYL-VPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTP---SDEPVDMGEAMGLTIAKATPLEVLVSP 443
            YL+A+IKE++RL+P   LL+P ES+E+  + GY  +PA TQ  +N W I RDP  WE P +F PERFL  + DID+ G  FEL+PFGSGRR CP  SF + V++L LA LVH F+F  P     E +DM E  G+   + +PL V+ +P
Sbjct:  358 YLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFL--NNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPLPVVATP 504          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.568e-33
Identity = 71/152 (46.71%), Postives = 102/152 (67.11%), Query Frame = 3
Query:    9 YLQAIIKETMRLYPAGPLLLPHESIEECIVNGYLVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDV--GGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTP-SDEPVDMGEAMGLTIAKATPLEVLVSPRLSA 455
            YL+A IKET+RL+P  P LLPH S  +  ++GY VPAGT++ V+AW + RD   WE+P +F PERF+     +DV   G+D   IPFGSGRR+CP ++FG   M++MLA+L++ FD+  P S   V M E+ GLT+ +   L  L+ PR+++
Sbjct:  387 YLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGLTLRRKEKL--LLVPRIAS 536          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.353e-33
Identity = 71/152 (46.71%), Postives = 97/152 (63.82%), Query Frame = 3
Query:    3 LVYLQAIIKETMRLYPAGPLLLPHESIEECIVNGYLVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTPS---DEPVDMGEAMGLTIAKATPLEVLVSPRL 449
            L YLQA +KETMRLYP   +++PH  +E C V GY +P G  + VNA  I RDP  W++P +FQPERFL    DI+  G+ F+ IPFGSGRR+CP     ++++ L+LASLVH F +  P    +E +DM E   L++  A PL V+   R+
Sbjct:  338 LPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFL--DSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIPKVRI 487          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.353e-33
Identity = 70/152 (46.05%), Postives = 103/152 (67.76%), Query Frame = 3
Query:    3 LVYLQAIIKETMRLYPAGPLLLPHESIEECIVNGYLVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTPS---DEPVDMGEAMGLTIAKATPLEVLVSPRL 449
            L+YL++IIKETMRL+P  PLL+P  S E C +NGY +P+ T++ +NAW I R+P  W E   F+PERFL  +  ID  G DFE IPFG+GRR+CP ++F +  ++L LA L++ FD+  P+   +E +DM E+ G+T+ +   L ++   RL
Sbjct:  360 LIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFL--NSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPITRL 509          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.380e-33
Identity = 74/150 (49.33%), Postives = 101/150 (67.33%), Query Frame = 3
Query:    9 YLQAIIKETMRLYPAGP-LLLPHESIEECIVNGYL-VPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTP---SDEPVDMGEAMGLTIAKATPLEVLVSP 443
            YL+A+IKE++RL+P    LL+P ES+E+  + GY  +PA TQ  +NAW I RDP  WE P ++QPERFL  + D DV G +F+L+PFG+GRR CP  SF + V++L LA LVH FDF  P     E +DM E +G+T  +  PL V+ +P
Sbjct:  357 YLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFL--NSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVVATP 504          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.720e-33
Identity = 64/154 (41.56%), Postives = 103/154 (66.88%), Query Frame = 3
Query:    9 YLQAIIKETMRLYPAGPLLLPHESIEECIVNGYLVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKD--IDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTPSD-----EPVDMGEAMGLTIAKATPLEVLVSPRL 449
            YL+A IKE+MR++P  P LLPH S  +C +NGY +PAGT++ VNAW + RDP  W++  +F PERFL + +D  +D+ G+D   +PFG+GRR+C   +F +  +++MLA+L++ FD+  P++       VDM +  G+T+ +   L ++  PR+
Sbjct:  377 YLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLV--PRI 528          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 5.720e-33
Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 3
Query:    3 LVYLQAIIKETMRLYPAGPLLLPHESIEECIVNGYLVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTRHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTPSD---EPVDMGEAMGLTIAKATPLEVLVSPR 446
            L YL+ +I ET RL+P  PLL+P E + E  +NGY +PA T+L+VN W I RDP  W++P +F PERF+  + +ID  GQ+FEL+PFGSGRRMCPA+  G  +++  LA+L++ FD+  P     E +DM E+ GL  +K    E+++ PR
Sbjct:  349 LHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFV--NSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPGLNASKKN--ELVLVPR 495          
BLAST of CK739867 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 7.470e-33
Identity = 76/158 (48.10%), Postives = 100/158 (63.29%), Query Frame = 3
Query:    3 LVYLQAIIKETMRLYPAGPLLLPHESIEECI-VNGYLVPAGTQLFVNAWKIQRDPCVW-EEPCQFQPERFLT-RHKDIDVGGQDFELIPFGSGRRMCPAVSFGLQVMQLMLASLVHGFDFTTP-SDEPVDMGEAMGLTIAKATPLEVLVSPRLSASLY 464
            L YLQAI KET R +P+ PL LP   I   + VNGY +P GT+L VN W I RDP VW + P +F PERFL  R+  ID  G  FELIPFG+GRR+C     G+ +++ +L +LVH FD+    S++ ++M E  GL + KA PL  +V PRL   +Y
Sbjct:  357 LPYLQAICKETFRKHPSTPLNLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAMVIPRLPLHVY 514          
The following BLAST results are available for this feature:
BLAST of CK739867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
C76A1_SOLME8.824e-3446.94Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C98A1_SORBI1.153e-3342.11Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71A4_SOLME1.966e-3348.99Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71C2_MAIZE2.568e-3346.71Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C80A1_BERST3.353e-3346.71Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71DA_SOYBN3.353e-3346.05Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71A2_SOLME4.380e-3349.33Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71C1_MAIZE5.720e-3341.56Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71BY_ARATH5.720e-3347.02Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C75A4_GENTR7.470e-3348.10Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6258 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739867 ID=CK739867; Name=CK739867; organism=Citrus sinensis; type=EST; length=474bp
ATTTGGTTTACTTGCAGGCCATTATCAAGGAAACAATGCGTTTATACCCT
GCTGGACCACTTTTACTACCTCACGAGTCTATAGAAGAATGCATCGTCAA
TGGTTACCTCGTCCCTGCAGGCACCCAACTGTTTGTTAACGCCTGGAAGA
TTCAACGCGATCCATGTGTTTGGGAGGAGCCATGTCAATTTCAGCCAGAA
AGATTTCTTACTAGGCATAAGGATATTGATGTTGGGGGACAAGATTTTGA
ATTGATACCATTTGGGAGTGGAAGAAGAATGTGTCCTGCAGTGTCATTTG
GCCTCCAAGTTATGCAACTAATGCTTGCTTCATTAGTGCATGGGTTTGAT
TTTACAACCCCATCAGATGAACCGGTTGACATGGGAGAGGCAATGGGCCT
AACCATTGCTAAGGCTACTCCGCTTGAAGTGCTTGTTAGTCCGCGCCTTT
CTGCTTCTTTATATGGTTAAAATT
back to top