CK739872

Overview
NameCK739872
Unique NameCK739872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.213e-32
Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+ RA D++    +ELAA+ET + GKP  ++   ++     +L YYAG    + G  +P  G+  + T  EP+GV   I  WN+PL +  WK APAL  GN ++ K +E T LTAL +A ++ EAGLP GV NV++G G   G  L  H
Sbjct:   60 WAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.213e-32
Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+ RA D++    +ELAA+ET + GKP  ++   ++     +L YYAG    + G  +P  G+  + T  EP+GV   I  WN+PL +  WK APAL  GN ++ K +E T LTAL +A ++ EAGLP GV NV++G G   G  L  H
Sbjct:   60 WAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.213e-32
Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+ RA D++    +ELAA+ET + GKP  ++   ++     +L YYAG    + G  +P  G+  + T  EP+GV   I  WN+PL +  WK APAL  GN ++ K +E T LTAL +A ++ EAGLP GV NV++G G   G  L  H
Sbjct:   60 WAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.213e-32
Identity = 68/160 (42.50%), Postives = 95/160 (59.38%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  +RSRI+ RA DL+ +  +ELAALET + GKP  ++   ++     +L YYAG    I G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAG+P GV NV++G G   G  L  H
Sbjct:   60 WAAMTAMQRSRILRRAVDLLRERNDELAALETLDTGKPLAETRAVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.213e-32
Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+ RA D++ +  +ELA LET + GKP  ++   ++     +L YYAG    + G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E T LTAL +A+++ EAGLP GV NV++G G + G AL +H
Sbjct:   60 WAAMTAMERSRILRRAVDILRERNDELALLETHDTGKPLSETRTVDIVTGADVLEYYAGLIPMLEGQQIPLRDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGTGKSVGQALTTH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.203e-31
Identity = 67/160 (41.88%), Postives = 95/160 (59.38%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAG+P GV NV++G G   G  L  H
Sbjct:   60 WAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.203e-31
Identity = 67/160 (41.88%), Postives = 95/160 (59.38%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAG+P GV NV++G G   G  L  H
Sbjct:   60 WAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_ECOSE (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=betB PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.203e-31
Identity = 67/160 (41.88%), Postives = 93/160 (58.13%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG    + G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H
Sbjct:   60 WAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETLFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 1.203e-31
Identity = 67/160 (41.88%), Postives = 93/160 (58.13%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG    + G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H
Sbjct:   60 WASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEH 219          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_ECOL5 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.203e-31
Identity = 67/160 (41.88%), Postives = 93/160 (58.13%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG    + G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A+++ EAGLP GV NV+ G G   G  L  H
Sbjct:   60 WAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEH 219          
The following BLAST results are available for this feature:
BLAST of CK739872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_YERPE9.213e-3242.50Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPB9.213e-3242.50Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPA9.213e-3242.50Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_PSEA79.213e-3242.50Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_ERWCT9.213e-3241.88Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
BETB_PSEAE1.203e-3141.88Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA81.203e-3141.88Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_ECOSE1.203e-3141.88Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLI1.203e-3141.88Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOL51.203e-3141.88Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6264 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739872 ID=CK739872; Name=CK739872; organism=Citrus sinensis; type=EST; length=495bp
CTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTATGTTGCGGGCT
GCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAGCTTTGGAGACATG
GAACAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAGTACCAATGG
TGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGATAAAATCCACGGA
CTAACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACC
AATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGT
TTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTA
AAGTCTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATT
CCATGAGGCTGGTCTTCCCCCTGGTGTTTTGAATGTAGTCTCTGGTTATG
GGCCAACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACA
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