CK739872

Overview
NameCK739872
Unique NameCK739872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 9.798e-50
Identity = 89/164 (54.27%), Postives = 125/164 (76.22%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W ++TP ER  ++ + ADL+E++++ LAA+E+ +NGK +  + K ++   +  L YYAGWADKIHG T+  +      T HEP+GV GQI+PWNFPLL+++WK+ PA+  GNT+VLK+AEQTPL+ALY AKL  EAG P GV+NV+SG+G TAGAA++SHMD+D
Sbjct:   73 WRQVTPSERGILINKLADLMERDIDTLAAIESLDNGKAFTMA-KVDLANSIGCLRYYAGWADKIHGQTIDTNPETLTYTRHEPVGVCGQIIPWNFPLLMWSWKIGPAVAAGNTVVLKTAEQTPLSALYAAKLIKEAGFPAGVINVISGFGRTAGAAISSHMDID 235          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.280e-49
Identity = 89/164 (54.27%), Postives = 118/164 (71.95%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W  M   ER  ++ + ADL+E++   LA +E+ N GK +  +   +  + ++ L Y+AGWADKIHG T+P DG+    T  EPIGV GQI+PWN PL+LF WK+  AL+CGNT+++K AEQTPLTALY+A L  EAG PPGV+NVV GYG TAGAA++SHMD+D
Sbjct:   77 WRTMDASERGCLLNKLADLMERDRVLLATMESMNAGKIFTHAYLLDTEVSIKALKYFAGWADKIHGQTIPSDGDVFTYTRREPIGVCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDID 240          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 6.351e-49
Identity = 90/164 (54.88%), Postives = 117/164 (71.34%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W  M   ER +++ + ADLIE++   LA LE+ N GK +  +   ++   +++L Y AGWADKI G T+P DG +   T HEPIGV GQI PWN P++L   K+ PAL CGNT+++K AEQTPLTAL+VA L  EAG PPGV+N+V GYGPTAGAA++SHMDVD
Sbjct:   77 WRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.413e-48
Identity = 86/164 (52.44%), Postives = 115/164 (70.12%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W ++    R +++ + ADLIE++   LA LET + GKP++ +   ++   ++   Y+AGWADKI G T+P D N    T HEPIGV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTALY+A L  E G PPGV+N+V G+GPT GAA++SH  ++
Sbjct:   88 WRRLDALSRGQLLHQLADLIERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTDDNVMCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQIN 251          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.116e-48
Identity = 85/164 (51.83%), Postives = 115/164 (70.12%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W ++    R +++ + ADL+E++   LA LET + GKP++ +   ++   ++   Y+AGWADKI G T+P D N    T HEPIGV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTALY+A L  E G PPGV+N+V G+GPT GAA++SH  ++
Sbjct:   88 WRRLDALSRGQLLHQLADLVERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQIN 251          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 5.376e-48
Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W +M    R  ++ R ADL E+++  L++LET N GKPY +S   ++   +++L YYAGWADK  G  +P DG++   T HEP+G+ G I+PWN+P+L+ TWK+APAL+CGN IV+K AEQTPLTALY A L  EAG PPGV+NVV GYG   G +++SH+D++
Sbjct:   72 WRRMDASRRGHLLYRLADLFERDIAYLSSLETLNTGKPY-KSAYQDIVHCIQVLRYYAGWADKNMGQNIPVDGDFFSFTKHEPVGICGLIIPWNYPMLMMTWKMAPALSCGNCIVVKPAEQTPLTALYCASLMEEAGFPPGVVNVVPGYGTICGQSISSHLDIN 234          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.376e-48
Identity = 89/164 (54.27%), Postives = 115/164 (70.12%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W  M   ER +++ + ADLIE++   LA LE+ N GK +  +   ++   ++ L Y AGWADKI G T+P DG +   T HEPIGV G I PWN P++L   K+ PAL CGNT+++K AEQTPLTAL+VA L  EAG PPGV+N+V GYGPTAGAA++SHMDVD
Sbjct:   77 WRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 2.668e-47
Identity = 85/163 (52.15%), Postives = 119/163 (73.01%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W  M   +R  ++   ADL+E++   LA+LE+ +NGKP+ +S   ++  V+++  Y+AGWADK HG T+P DG +   T HEP+GV  QI+PWNFPL++ +WK+A AL  GNT+V K AEQTP +ALY+A L  E GLPPG++N+V+GYGPTAGAA+A HMD+
Sbjct:   87 WRWMDALKRGWLLNHLADLVERDCVYLASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCCQIIPWNFPLVMQSWKLALALAMGNTVVTKVAEQTPFSALYLASLIKEVGLPPGLVNIVTGYGPTAGAAIAHHMDI 249          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 5.944e-47
Identity = 86/164 (52.44%), Postives = 114/164 (69.51%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W  M+P  RSR+M + ADL+E++  ELA LET +NGKP  ++   ++P+ +  + YYAGW  KI G T+P  G Y   T HEP+GV GQI+PWNFPLL+  WK+  AL  G TIVLK AEQTPL+ALY+A+L  +AG P GV+N++ G+G  AG AL +H  VD
Sbjct:   75 WRTMSPASRSRLMYKLADLMEEHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWCTKITGQTIPVSGAYFNYTRHEPVGVVGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLSALYLAELIDQAGFPAGVINIIPGFGEDAGEALTNHEAVD 238          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 5.032e-46
Identity = 91/167 (54.49%), Postives = 115/167 (68.86%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL---TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W + TP  R +++   A+L EKN++ LAA+E+ +NGK  +   K ++ M V  L YY GWADKI G    T P   NY      EPIGV GQI+PWNFPLL++ WK+ PA+ CGNT+VLK+AEQTPL  L  A L  EAG PPGV+NV+SG+G  AGAAL+SHMDVD
Sbjct:   72 WRQETPENRGKLLNNLANLFEKNIDLLAAVESLDNGKA-ISMAKGDISMCVGCLRYYGGWADKITGKVIDTTPDTFNY---VKKEPIGVCGQIIPWNFPLLMWAWKIGPAIACGNTVVLKTAEQTPLGGLVAASLVKEAGFPPGVINVISGFGKVAGAALSSHMDVD 234          
The following BLAST results are available for this feature:
BLAST of CK739872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH_EMENI9.798e-5054.27Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
AL1A7_RAT1.280e-4954.27Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
ALDH1_MACPR6.351e-4954.88Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
AL1A3_RAT2.413e-4852.44Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
AL1A3_MOUSE4.116e-4851.83Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
CROM_ENTDO5.376e-4851.83Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]
ALDH1_ELEED5.376e-4854.27Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
AL1B1_BOVIN2.668e-4752.15Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
ALDH4_BACSU5.944e-4752.44Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
ALDH_CLAHE5.032e-4654.49Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6264 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739872 ID=CK739872; Name=CK739872; organism=Citrus sinensis; type=EST; length=495bp
CTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTATGTTGCGGGCT
GCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAGCTTTGGAGACATG
GAACAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAGTACCAATGG
TGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGATAAAATCCACGGA
CTAACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACC
AATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGT
TTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTA
AAGTCTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATT
CCATGAGGCTGGTCTTCCCCCTGGTGTTTTGAATGTAGTCTCTGGTTATG
GGCCAACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACA
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