CK739872

Overview
NameCK739872
Unique NameCK739872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: FTHFD_PONAB (10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.512e-37
Identity = 75/167 (44.91%), Postives = 108/167 (64.67%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W K++  +R R++ R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G I+PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+NV+ G G   G  L+ H DV
Sbjct:  477 WGKISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDV 643          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 73/167 (43.71%), Postives = 107/167 (64.07%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W K+   +R R++ R ADL+E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+N++ G G   G  L+ H DV
Sbjct:  477 WGKINARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDV 643          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: FTHFD_RAT (10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 2.119e-36
Identity = 72/167 (43.11%), Postives = 107/167 (64.07%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W K+   +R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P      N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+N++ G G   G  L+ H DV
Sbjct:  477 WGKINARDRGRLLYRLADVMEQHQEELATIEALDRGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDV 643          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.165e-36
Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W   +  ERS I+LR AD IE N+E LA +E+W+NGKP  ++L +++P+ +    Y+A       G     D       L EPIGV GQI+PWNFPLL+  WK+APAL  G T+VLK AEQTP++ L++ ++  +  +P GV+NVV+G+G  AG ALA+   +D
Sbjct:   72 WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIGDL-IPAGVINVVNGFGSEAGNALATSQRID 234          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 6.165e-36
Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W   +  ERS I+LR AD IE N+E LA +E+W+NGKP  ++L +++P+ +    Y+A       G     D       L EPIGV GQI+PWNFPLL+  WK+APAL  G T+VLK AEQTP++ L++ ++  +  +P GV+NVV+G+G  AG ALA+   +D
Sbjct:   72 WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIGDL-IPAGVINVVNGFGSEAGNALATSQRID 234          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: FEAB_ECOLI (Phenylacetaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=feaB PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.373e-35
Identity = 83/169 (49.11%), Postives = 99/169 (58.58%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV------PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W    P ER RI+LR ADL+E++ EELA LET   GK    S   EV   +  + Y AG   KI G T+      P    Y   T  EP+GV   IVPWNFPL++  WKV PAL  G +IV+K +E TPLT L VA+L  EAG+P GV NVV+G G   GAAL SH  V
Sbjct:   75 WAGRLPAERERILLRFADLVEQHSEELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHV 243          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH_MYCTU (Probable aldehyde dehydrogenase OS=Mycobacterium tuberculosis GN=Rv0458 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.373e-35
Identity = 75/159 (47.17%), Postives = 98/159 (61.64%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 479
            W K  P ER+ I+   AD I+KN   LA  E W+NGKP  ++L +++P+ V    Y+A       G     D +      HEP+GV GQI+PWNFP+L+  WK+APAL  GNT VLK AEQTP + LY+  L  +  LPPGV+NVV+G+G  AG  LAS
Sbjct:   73 WGKTAPAERAAILNMIADRIDKNAAALAVAEVWDNGKPVREALAADIPLAVDHFRYFAAAIRAQEGALSQIDEDTVAYHFHEPLGVVGQIIPWNFPILMAAWKLAPALAAGNTAVLKPAEQTPASVLYLMSLIGDL-LPPGVVNVVNGFGAEAGKPLAS 230          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH_MYCBO (Probable aldehyde dehydrogenase OS=Mycobacterium bovis GN=Mb0467 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.373e-35
Identity = 75/159 (47.17%), Postives = 98/159 (61.64%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 479
            W K  P ER+ I+   AD I+KN   LA  E W+NGKP  ++L +++P+ V    Y+A       G     D +      HEP+GV GQI+PWNFP+L+  WK+APAL  GNT VLK AEQTP + LY+  L  +  LPPGV+NVV+G+G  AG  LAS
Sbjct:   73 WGKTAPAERAAILNMIADRIDKNAAALAVAEVWDNGKPVREALAADIPLAVDHFRYFAAAIRAQEGALSQIDEDTVAYHFHEPLGVVGQIIPWNFPILMAAWKLAPALAAGNTAVLKPAEQTPASVLYLMSLIGDL-LPPGVVNVVNGFGAEAGKPLAS 230          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: ALDH_STRCO (Probable aldehyde dehydrogenase OS=Streptomyces coelicolor GN=SCO1174 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.060e-35
Identity = 74/159 (46.54%), Postives = 100/159 (62.89%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 479
            W + +  ERS I+L+ AD +E N+E LA  E+W NGKP  ++L +++P+ +    Y+AG      G     D +      HEP+GV  QI+PWNFP+L+ TWK+APAL  GN +VLK AEQTP +  Y   L  +  LPPGVLNVV+G+G  AG  LAS
Sbjct:   73 WGRTSVTERSDILLKIADRMEANLERLAVAESWENGKPVRETLAADIPLAIDHFRYFAGAVRAQEGSLGEIDDDTVAYHFHEPLGVVAQIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIHYWLSLVADL-LPPGVLNVVNGFGVEAGKPLAS 230          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.996e-35
Identity = 73/164 (44.51%), Postives = 100/164 (60.98%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   ++     +L YYAG A  + G+ VP        T HEP+GV G I  WN+P+ +  WK APAL  GN ++ K +E TPLTAL +A++F EAGLP GV NV+ G G + G AL  H +++
Sbjct:   60 WAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIE 223          
The following BLAST results are available for this feature:
BLAST of CK739872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FTHFD_PONAB9.512e-3744.9110-formyltetrahydrofolate dehydrogenase OS=Pongo a... [more]
FTHFD_MOUSE1.622e-3643.7110-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
FTHFD_RAT2.119e-3643.1110-formyltetrahydrofolate dehydrogenase OS=Rattus ... [more]
ALDH_VIBCH6.165e-3645.12Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]
ALDH_VIBC36.165e-3645.12Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
FEAB_ECOLI1.373e-3549.11Phenylacetaldehyde dehydrogenase OS=Escherichia co... [more]
ALDH_MYCTU1.373e-3547.17Probable aldehyde dehydrogenase OS=Mycobacterium t... [more]
ALDH_MYCBO1.373e-3547.17Probable aldehyde dehydrogenase OS=Mycobacterium b... [more]
ALDH_STRCO3.060e-3546.54Probable aldehyde dehydrogenase OS=Streptomyces co... [more]
BETB_XANCP3.996e-3544.51Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6264 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739872 ID=CK739872; Name=CK739872; organism=Citrus sinensis; type=EST; length=495bp
CTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTATGTTGCGGGCT
GCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAGCTTTGGAGACATG
GAACAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAGTACCAATGG
TGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGATAAAATCCACGGA
CTAACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACC
AATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGT
TTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTA
AAGTCTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATT
CCATGAGGCTGGTCTTCCCCCTGGTGTTTTGAATGTAGTCTCTGGTTATG
GGCCAACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACA
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