CK739872

Overview
NameCK739872
Unique NameCK739872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:595..1089. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.983e-34
Identity = 74/163 (45.40%), Postives = 101/163 (61.96%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W  MT  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+
Sbjct:   60 WATMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDI 221          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.983e-34
Identity = 74/163 (45.40%), Postives = 101/163 (61.96%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W  MT  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+
Sbjct:   60 WAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDI 221          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.383e-34
Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W  MT  +RSRI+ RA +L+ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I GL VP   +  + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPL+AL +A+++ EAG+P GV NVV G G + GA L  H D+
Sbjct:   60 WAAMTAMQRSRILRRAVELLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGLQVPLRADSFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDI 221          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.418e-34
Identity = 73/163 (44.79%), Postives = 101/163 (61.96%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W  +T  +RSRI+ RA DL+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+
Sbjct:   60 WAALTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDI 221          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.771e-34
Identity = 73/163 (44.79%), Postives = 101/163 (61.96%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W  MT  +RSRI+ RA +L+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+
Sbjct:   60 WAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDI 221          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.771e-34
Identity = 73/163 (44.79%), Postives = 101/163 (61.96%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 491
            W  MT  +RSRI+ RA +L+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP      + T  EP+GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+
Sbjct:   60 WAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDI 221          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.537e-34
Identity = 77/160 (48.12%), Postives = 95/160 (59.38%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 482
            W  MT  ERSRI+LRA  L+ +  +ELA LET N GKP  ++   ++      L YYAG A  I G  +P      + T  EP+GV G I  WN+P+ +  WK APAL  GN IV K +E TPLTAL +A++F EAGLP GV NVV G G   GA L  H
Sbjct:   60 WAAMTGMERSRILLRAVALLRERNDELAELETRNTGKPISETASVDIVTGADALEYYAGLAPAIEGSQIPLRDTRLVYTRREPLGVIGAIGAWNYPIQIACWKAAPALAAGNAIVFKPSEVTPLTALKLAEIFTEAGLPDGVFNVVQGDG-RVGAMLTEH 218          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: THCA_RHOER (EPTC-inducible aldehyde dehydrogenase OS=Rhodococcus erythropolis GN=thcA PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 9.843e-34
Identity = 69/159 (43.40%), Postives = 103/159 (64.78%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 479
            W K +  ER+ I+ + AD +E+N+E +A  E+W+NGKP  ++L +++P+ +    Y+AG      G     + +      HEP+GV GQI+PWNFP+L+  WK+APAL  GN IVLK AEQTP++ L++  +  +  LP GVLN+V+G+G  AG  LAS
Sbjct:   73 WGKTSVAERAIILNKIADRMEENLESIALAESWDNGKPIRETLNADIPLAIDHFRYFAGAIRAQEGSLSEINSDTVAYHFHEPLGVVGQIIPWNFPILMAVWKLAPALAAGNAIVLKPAEQTPVSILHLIGIIGDL-LPAGVLNIVNGFGVEAGKPLAS 230          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_BURPP (Betaine aldehyde dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=betB PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.286e-33
Identity = 72/164 (43.90%), Postives = 102/164 (62.20%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W  +T  +RSRI+ RA DL+ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I G  +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+AL +A++F EAG+P GV NVV G G   GA LA+H D++
Sbjct:   60 WAALTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGQQIPLRPTSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEITPLSALKLAEIFTEAGVPAGVFNVVQGDG-RVGAMLAAHPDIE 222          
BLAST of CK739872 vs. ExPASy Swiss-Prot
Match: BETB_MARMS (Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=betB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.740e-33
Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 3
Query:    3 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG-LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 494
            W  M+P ER RI+ +AA+L+ +N EELA LE  + GKP  +++  ++     ++ YYAG  DKI G     G+GN+   T  EP+G+   I  WN+P+ +  WK  PAL  GN ++ K +E+TPLTAL +A++F EAGLP GV NV+ G   T G  + +H D+D
Sbjct:   57 WSAMSPVERGRILKKAAELLRENNEELARLEVLDTGKPLQEAIVVDIQTGADVIEYYAGLTDKIQGDYQDLGNGNF-FYTRREPLGICAGIGAWNYPIQIAMWKSGPALAAGNAMIFKPSEETPLTALKLAEIFTEAGLPDGVFNVIQGDART-GQLITNHPDID 219          
The following BLAST results are available for this feature:
BLAST of CK739872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BURCC1.983e-3445.40Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURA41.983e-3445.40Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURM13.383e-3444.79Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]
BETB_BURVG4.418e-3444.79Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_BURCH5.771e-3444.79Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA5.771e-3444.79Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_CHRSD7.537e-3448.13Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
THCA_RHOER9.843e-3443.40EPTC-inducible aldehyde dehydrogenase OS=Rhodococc... [more]
BETB_BURPP1.286e-3343.90Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
BETB_MARMS3.740e-3343.03Betaine aldehyde dehydrogenase OS=Marinomonas sp. ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6264 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739872 ID=CK739872; Name=CK739872; organism=Citrus sinensis; type=EST; length=495bp
CTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTATGTTGCGGGCT
GCTGACTTGATTGAGAAAAACATGGAGGAGCTGGCAGCTTTGGAGACATG
GAACAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAGTACCAATGG
TGGTTCGCCTGTTGCACTATTATGCTGGATGGGCTGATAAAATCCACGGA
CTAACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACC
AATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGT
TTACTTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTA
AAGTCTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATT
CCATGAGGCTGGTCTTCCCCCTGGTGTTTTGAATGTAGTCTCTGGTTATG
GGCCAACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACA
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