CK739881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: RAN_DROME (GTP-binding nuclear protein Ran OS=Drosophila melanogaster GN=ran PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.387e-35 Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 2 Query: 32 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 Q+ D P+FK V+VGDGGTGKTTFVKRH+TGEFEKKY T+GVEVHPL F TN G IRF WDTAGQEKFGGLRDGYYI GQCA+IM Sbjct: 3 QEGQDIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQGQCAVIM 89
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.545e-35 Identity = 67/83 (80.72%), Postives = 74/83 (89.16%), Query Frame = 2 Query: 44 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 + P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY TIGVEVHPL F+TN G+I+F WDTAGQEKFGGLRDGYYI+ QC IIM Sbjct: 4 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIM 86
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: GSP1_NEUCR (GTP-binding nuclear protein GSP1/Ran OS=Neurospora crassa GN=gsp-1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.854e-35 Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 2 Query: 50 PSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+I+F WDTAGQEKFGGLRDGYYI+GQC IIM Sbjct: 6 PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYMATLGVEVHPLGFSTNFGQIQFDVWDTAGQEKFGGLRDGYYINGQCGIIM 86
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: RAN_ONCVO (GTP-binding nuclear protein Ran OS=Onchocerca volvulus GN=ran-1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.681e-34 Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 2 Query: 44 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 D P+FKLV+VGDGGTGKTTFVKRHLTG+ EKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI GQCAIIM Sbjct: 6 DIPTFKLVLVGDGGTGKTTFVKRHLTGDPEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIM 88
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.681e-34 Identity = 67/85 (78.82%), Postives = 74/85 (87.06%), Query Frame = 2 Query: 38 TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 + + P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY TIGVEVHPL F TN G+I+F WDTAGQEKFGGLRDGYYI+ QC IIM Sbjct: 2 SAEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFHTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIM 86
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: RAN_BRUMA (GTP-binding nuclear protein Ran OS=Brugia malayi PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.195e-34 Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 2 Query: 44 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 D P+FKLV+VGDGGTGKTTFVKRHLTG+FEKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI GQCA M Sbjct: 6 DIPTFKLVLVGDGGTGKTTFVKRHLTGDFEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAFNM 88
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: GSP1_CANAL (GTP-binding nuclear protein GSP1/Ran OS=Candida albicans GN=GSP1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.387e-34 Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 2 Query: 44 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 + P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEV+PL F TN G+++F WDTAGQEKFGGLRDGYYI+GQC IIM Sbjct: 4 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVNPLGFHTNFGELKFDVWDTAGQEKFGGLRDGYYINGQCGIIM 86
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: SPI1_SCHPO (GTP-binding nuclear protein spi1 OS=Schizosaccharomyces pombe GN=spi1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.342e-34 Identity = 67/86 (77.91%), Postives = 72/86 (83.72%), Query Frame = 2 Query: 35 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 Q + P+FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+I F WDTAGQEK GGLRDGYYI GQC IIM Sbjct: 3 QPQNVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIM 88
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.170e-33 Identity = 66/79 (83.54%), Postives = 69/79 (87.34%), Query Frame = 2 Query: 56 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI QCAIIM Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIM 89
BLAST of CK739881 vs. ExPASy Swiss-Prot
Match: RAN_XENLA (GTP-binding nuclear protein Ran OS=Xenopus laevis GN=ran PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 3.170e-33 Identity = 66/79 (83.54%), Postives = 69/79 (87.34%), Query Frame = 2 Query: 56 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIM 292 FKLV+VGDGGTGKTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI QCAIIM Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIM 89 The following BLAST results are available for this feature:
BLAST of CK739881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739881 ID=CK739881; Name=CK739881; organism=Citrus sinensis; type=EST; length=292bpback to top |