CK739882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_NEUCR (40S ribosomal protein S16 OS=Neurospora crassa GN=rps-16 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.791e-44 Identity = 80/117 (68.38%), Postives = 100/117 (85.47%), Query Frame = 3 Query: 3 CKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 C +G+GLIK+NG P++L PEILR K YEPILLLG +FA VD+R++V GGGH SQ+YA+RQ+IAKA+VA+Y KYVDE SK +K L+++DRTLLVADPRRCEPKKFGG+GAR+RF Sbjct: 21 CVQGKGLIKVNGVPLKLYAPEILRAKLYEPILLLGTDKFAEVDIRLKVSGGGHVSQVYAVRQAIAKAIVAYYAKYVDEHSKNTLKTALIQFDRTLLVADPRRCEPKKFGGKGARSRF 137
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_CANGA (40S ribosomal protein S16 OS=Candida glabrata GN=RPS16 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.158e-43 Identity = 82/116 (70.69%), Postives = 98/116 (84.48%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 K G+GLIK+NG PI LVEPEILRFK YEP+LL+G +FA +D+R+RV GGGH SQ+YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL+AD RR EPKKFGG+GARARF Sbjct: 23 KAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLLIADARRPEPKKFGGKGARARF 138
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_ASHGO (40S ribosomal protein S16 OS=Ashbya gossypii GN=RPS16 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.158e-43 Identity = 82/116 (70.69%), Postives = 98/116 (84.48%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 K G+GLIK+NG PI LV+PEILRFK YEP+LL+G +FA +D+R+RV GGGH SQ+YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL+AD RR EPKKFGGRGARARF Sbjct: 23 KAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGRGARARF 138
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_YEAST (40S ribosomal protein S16 OS=Saccharomyces cerevisiae GN=RPS16A PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 1.976e-43 Identity = 81/116 (69.83%), Postives = 98/116 (84.48%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 K G+GLIK+NG PI LVEPEILRFK YEP+LL+G +F+ +D+R+RV GGGH SQ+YAIRQ+IAK LVA++QKYVDEQSK E+K YDRTLL+AD RR EPKKFGG+GAR+RF Sbjct: 23 KAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRF 138
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_CANAL (40S ribosomal protein S16 OS=Candida albicans GN=RPS16 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.581e-43 Identity = 82/116 (70.69%), Postives = 97/116 (83.62%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 K G+GLIKING PI LV+PEILRFK YEP+ L+G +F G+D+R++V GGGH SQ+YAIRQ+IAK LVA++QKYVDE SK E+K I YD+TLLVAD RR EPKKFGGRGARARF Sbjct: 22 KAGKGLIKINGSPITLVQPEILRFKVYEPLTLVGLDKFQGIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEASKNELKKIFASYDKTLLVADSRRMEPKKFGGRGARARF 137
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_KLULA (40S ribosomal protein S16 OS=Kluyveromyces lactis GN=RPS16 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.749e-43 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 K G+GLIK+NG PI LV+PEILRFK YEP+LL+G +FA +D+R++V GGGH SQ+YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL+AD RR EPKKFGGRGAR+RF Sbjct: 23 KAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGRGARSRF 138
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_CAEEL (40S ribosomal protein S16 OS=Caenorhabditis elegans GN=rps-16 PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 9.806e-43 Identity = 79/117 (67.52%), Postives = 100/117 (85.47%), Query Frame = 3 Query: 3 CKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 CK+G+GLIK+NG P+E +EP+ILR K EP+LL+G+ RF VD+RIRV GGGH +QIYA+RQ++AKALVA+Y KYVDEQSK+E+K+I YD++LLVADPRR E KKFGG GARAR+ Sbjct: 23 CKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPGARARY 139
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_DEBHA (40S ribosomal protein S16 OS=Debaryomyces hansenii GN=RPS16 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.726e-42 Identity = 78/116 (67.24%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 K G+GLIK+NG PI LV+PEILRFK YEP+ L+G +F +D+R++V GGGH SQ+YAIRQ+IAK LVA++QK+VDE SK E+K + YD+TLLVAD RR EPKKFGGRGARARF Sbjct: 22 KAGKGLIKVNGAPITLVQPEILRFKVYEPLTLVGLDKFQNIDIRVKVSGGGHVSQVYAIRQAIAKGLVAYHQKFVDEASKNELKKVFASYDKTLLVADSRRMEPKKFGGRGARARF 137
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_DICDI (40S ribosomal protein S16 OS=Dictyostelium discoideum GN=rps16 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.415e-41 Identity = 75/114 (65.79%), Postives = 100/114 (87.72%), Query Frame = 3 Query: 12 GRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 G+GLIK+NG P+E ++P+ L+ K YEP+L++G+ F+ VD+R+RV+GGG +QIYAIRQ+IAK++VA++QKYVDE+SK EIK ++ YDR+LLVADPRRCEPKKFGGRGARARF Sbjct: 29 GKGLIKVNGVPLEFIQPKNLKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQAIAKSIVAYHQKYVDEESKNEIKKKILDYDRSLLVADPRRCEPKKFGGRGARARF 142
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS16_SACEX (40S ribosomal protein S16 OS=Saccharomyces exiguus GN=RPS16 PE=3 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 3.155e-41 Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 K G+GLIK+NG PI LV+PEILRFK YEP+LL+G +F +D+R+RV GGGH SQ+YAIRQ+IAK L+A++QK+VDEQSK E+K YDRTLL+AD R EPKKFGG+GAR+R+ Sbjct: 23 KAGKGLIKVNGAPITLVQPEILRFKVYEPLLLVGLDKFTNIDIRVRVTGGGHVSQVYAIRQAIAKGLIAYHQKFVDEQSKNELKRAFTLYDRTLLIADSRMPEPKKFGGKGARSRY 138 The following BLAST results are available for this feature:
BLAST of CK739882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739882 ID=CK739882; Name=CK739882; organism=Citrus sinensis; type=EST; length=354bpback to top |