CK739882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RLSX_METTH (Fused L13/S9 ribosomal protein OS=Methanobacterium thermoautotrophicum GN=rpl13p/rps9p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.626e-21 Identity = 55/115 (47.83%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARAR 350 + G+G ++IN P+EL PE+ R K EP+ L G VD+ +RV GGG Q A R IA+ LV D S ++K+ V+YDRT+LV DPRR EPKK+GGRGARAR Sbjct: 170 REGKGRVRINKVPVELYTPELARLKIMEPLKLAG-DVINDVDINVRVVGGGIVGQAEAARMVIARGLV-------DWTSDMDLKEKFVQYDRTMLVGDPRRSEPKKYGGRGARAR 276
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_METST (30S ribosomal protein S9P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps9p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.378e-20 Identity = 56/115 (48.70%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARAR 350 K G G +K+N P+EL EPE+ R K +EP+ L G VD+ +RV GGG Q A R IAK LV + +KD V+YDRT+LV DPRR E KKFGG GARAR Sbjct: 21 KEGTGRVKVNRKPVELYEPELARLKIFEPLELAG-DIVNSVDINVRVVGGGIMGQAEAARMVIAKGLVEY-------TGDMNLKDRYVQYDRTMLVGDPRRSESKKFGGPGARAR 127
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_METKA (30S ribosomal protein S9P OS=Methanopyrus kandleri GN=rps9p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARAR 350 + G G +++N P+ ++EPE+ R K EP+++ G + VD+ ++V+GGG SQ A R +IA+ LV + +++D + YDR +L DPRR EPKKFGGRGARAR Sbjct: 21 REGEGRVRVNKRPVNIIEPEMARMKIMEPLIIAGEDIVSQVDIDVKVQGGGWMSQAEAARIAIARGLVEW-------TGDPDLRDAYMAYDRHMLKGDPRRKEPKKFGGRGARAR 128
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_PYRHO (30S ribosomal protein S9P OS=Pyrococcus horikoshii GN=rps9p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.433e-19 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK 323 + GRG ++ING P+E++EPEI RF EP++L G + VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K Sbjct: 20 REGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHK 118
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_PYRAB (30S ribosomal protein S9P OS=Pyrococcus abyssi GN=rps9p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.433e-19 Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK 323 + G+G ++ING P+ELVEPEI RF EP++L G + VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K Sbjct: 20 REGKGRVRINGKPVELVEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHK 118
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_PYRFU (30S ribosomal protein S9P OS=Pyrococcus furiosus GN=rps9p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.561e-19 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK 323 + G+G ++ING P+E++EPEI RF EP++L G + VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K Sbjct: 20 REGKGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVEGGGFMGQAEAARMAIARALVEW-------TGDMSLKEKFMKYDRTMLVGDPRRTEPHK 118
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_THEVO (30S ribosomal protein S9P OS=Thermoplasma volcanium GN=rps9p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.290e-18 Identity = 52/115 (45.22%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARAR 350 K+G+G+I ING P EL E+LR K EP+ L + G+D+ ++VKGGG T Q A R +IA+ +V F Q E++++ +YDRTL+V D R PKK GGRGARA+ Sbjct: 20 KKGKGIITINGTPAELYPVEVLRNKILEPVKL-AEDKAKGIDVTVKVKGGGVTGQADASRTAIARGIVKFLQD-------NELENLFRQYDRTLIVNDVRIKLPKKPGGRGARAK 126
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_METJA (30S ribosomal protein S9P OS=Methanocaldococcus jannaschii GN=rps9p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.873e-18 Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK 323 + G+G I+IN PIEL+EP+ R K EPILL G + +D+ + VKGGG Q+ A R +I KA+V F KE++D + YDRTLLV+D RR EP K Sbjct: 21 REGKGRIRINKIPIELIEPKYKRMKLMEPILLAGEEVISQMDIDVTVKGGGVMGQMDAARTAIGKAIVEF-------TGSKELRDKFLAYDRTLLVSDARRTEPHK 119
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_HALSA (30S ribosomal protein S9P OS=Halobacterium salinarium GN=rps9p PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 6.401e-18 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 12 GRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARF 353 G G ++IN P+ELVEPE+ R K EP + G VD+ I V GGG Q A+R +IA+ LV Y E++D +DR+LLV D R+ E KK+GG GARAR+ Sbjct: 21 GEGRVRINSQPVELVEPEMARLKMLEPFRISGSDLRGDVDIDIDVAGGGFAGQADAVRTAIARGLVEHY-------GDAELRDAFREFDRSLLVNDVRQRESKKWGGPGARARY 127
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_THEAC (30S ribosomal protein S9P OS=Thermoplasma acidophilum GN=rps9p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 50/115 (43.48%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARAR 350 K+G+G++ ING P+EL +LR K EP LL+ + +D+ ++V+GGG T Q A R +IA+A+V KY+++ E++++ +YDRTL+V D R PKK GGRGARA+ Sbjct: 17 KKGKGIVTINGYPVELYPVRVLRNKIMEP-LLIAEDKAKDLDIAVKVRGGGVTGQADASRTAIARAIV----KYLNDT---ELENLFRQYDRTLIVNDVRIKLPKKAGGRGARAK 123 The following BLAST results are available for this feature:
BLAST of CK739882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739882 ID=CK739882; Name=CK739882; organism=Citrus sinensis; type=EST; length=354bpback to top |