CK739889

Overview
NameCK739889
Unique NameCK739889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.235e-22
Identity = 53/162 (32.72%), Postives = 95/162 (58.64%), Query Frame = 2
Query:   56 ERALEWKDFLSLF-YVSEEETSAFWPPVCKD-EMLEYMRSSEV--LIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            E   +W++ ++ F Y  +    + WP   +    +  M S E+  L  +L++VL + + +++ + + +  +   ++V +NYYP CP P LT+G+ RH+D  T T+LLQD +GGL   +D G  WI V P+ G+ ++N+GD    +SNGR+K+ +H  + N +
Sbjct:  123 EAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEK-EGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN 283          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.613e-22
Identity = 60/165 (36.36%), Postives = 92/165 (55.76%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            Y S+F      A  W+D  S     +       P +C+D M+EY +    L K L ++L + L ++  + + +        +  +YYP CP P+LT+G  +HSD S  T+LL D I GL VR++    W  V  +SG+LIINIGD LQ+++N ++ S+EH V+AN
Sbjct:  141 YLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEP-NHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREG--HWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLAN 302          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.106e-22
Identity = 56/165 (33.94%), Postives = 94/165 (56.97%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            Y S+F  +   A  W+D    +   +       P +C+D M+EY +   +L + L ++L + L +   + +++   L   R+  +Y+P CP P+LT G  +HSD S  T+LL D+I GL V ++    W  V  + G+LIINIGD LQ+++N ++ S++H V+AN
Sbjct:  141 YLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNP-NHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREG--YWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLAN 302          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.751e-22
Identity = 50/156 (32.05%), Postives = 89/156 (57.05%), Query Frame = 2
Query:   68 EWKDFLSLF-YVSEEETSAFWPPVCKDEML---EYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            +W++ ++ F Y +       WP   +  +    EY      L   L+ VL + + ++ ++ + +  +   +++ +NYYP CP P+LT+G+ RH+D  T T+LLQD +GGL   +D G  WI V P+ G+ ++N+GD    +SNGR+K+ +H  + N
Sbjct:  127 DWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLE-LEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVN 281          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.128e-22
Identity = 50/162 (30.86%), Postives = 92/162 (56.79%), Query Frame = 2
Query:   56 ERALEWKDFLSLF-YVSEEETSAFWPP---VCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGS 529
            E   +W++ ++ F Y       + WP      ++   +Y      L  +L+ VL + + +   + + +  +   ++V +N+YP CP P+LT+G+ RH+D  T T+LLQD +GGL   +D+G  WI V P+ G+ ++N+GD   ++SNGR+K+ +H  + N +
Sbjct:  123 EAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDT-EALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSN 283          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.775e-21
Identity = 63/175 (36.00%), Postives = 88/175 (50.29%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFLSLFY--------VSEEETSAFWPPVCKDEML--EYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            Y S+        L WK+ LS  +        V++  +S   P       +  +Y    + L   +M++L   L V+R    RE     S  +  NYYP CP PE T+G G H D +  TILLQDD+GGL V  D   +W  V+P+ G+++INIGD    +SNGRYKS  H  + N
Sbjct:  139 YTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVER-GYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDG--EWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVN 310          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.775e-21
Identity = 63/175 (36.00%), Postives = 88/175 (50.29%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFLSLFY--------VSEEETSAFWPPVCKDEML--EYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            Y S+        L WK+ LS  +        V++  +S   P       +  +Y    + L   +M++L   L V+R    RE     S  +  NYYP CP PE T+G G H D +  TILLQDD+GGL V  D   +W  V+P+ G+++INIGD    +SNGRYKS  H  + N
Sbjct:  139 YTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVER-GYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDG--EWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVN 310          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.509e-20
Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKD-FLSLFYVSEEETSAFWPPVCKDEM---LEYMRSSEVLIKRLMDVLVKGLNV------KRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YGS    +    LEW+D F  L Y  E+   + WP    D +    EY +   +L  ++   L  GL +      K +  + E +L    ++ +NYYP CP PEL +GV  H+D+S  T +L + + GL +  +    W+    +  S++++IGD L+I+SNG+YKSI H  + N
Sbjct:  125 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLL----QMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN 293          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.362e-20
Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKD-FLSLFYVSEEETSAFWPPVCKDEM---LEYMRSSEVLIKRLMDVLVKGLNV------KRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YGS    +    LEW+D F    Y  ++   + WP    D +    EY +    L  +++ VL  GL +      K +  + E +L    ++ +NYYP CP PEL +GV  H+D+S  T +L + + GL +  +    W+    +  S++++IGD L+I+SNG+YKSI H  + N
Sbjct:  129 YGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLL----QMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG--KWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVN 297          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.783e-20
Identity = 56/175 (32.00%), Postives = 89/175 (50.86%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKD-FLSLFYVSEEETSAFWPPVCKDEM---LEYMRSSEVLIKRLMDVLVKGLNV------KRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YGS    +    LEW+D F  L +  ++     WP    D +    EY      L  +++ VL  GL +      K +  + E +L    +  +NYYP CP PEL +GV  H+D+S  T +L + + GL +  +    W+    +  S+I++IGD ++I+SNG+YKSI H  + N
Sbjct:  131 YGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLL----QKKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG--KWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVN 299          
The following BLAST results are available for this feature:
BLAST of CK739889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FL3H_PETCR1.235e-2232.72Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
ACCH3_ARATH1.613e-2236.361-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH2.106e-2233.941-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_DIACA2.751e-2232.05Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_MALDO6.128e-2230.86Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
GAOX2_ORYSJ6.775e-2136.00Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI6.775e-2136.00Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
LDOX_ARATH1.509e-2032.57Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_MALDO3.362e-2032.00Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_VITVI9.783e-2032.00Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6281 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739889 ID=CK739889; Name=CK739889; organism=Citrus sinensis; type=EST; length=533bp
GGAGAATTCACCAATAAATAATGTCAGGTACGGCTCAAGCTTTGTTCCCC
ATGTGGAAAGGGCTCTCGAGTGGAAAGACTTTCTCAGCCTGTTTTATGTT
TCTGAGGAAGAAACTTCTGCTTTTTGGCCTCCTGTTTGCAAGGATGAAAT
GTTGGAGTACATGAGGAGTTCTGAAGTTCTCATCAAACGTTTAATGGATG
TGCTAGTAAAGGGGCTAAACGTGAAACGAATTGATGAAATAAGAGAACCT
ATGTTGTTGGGCTCAAGAAGAGTTAACCTCAACTATTATCCTATGTGTCC
CAATCCTGAACTCACAGTTGGCGTAGGCCGTCATTCAGATATTTCAACAT
TCACTATCCTCCTCCAAGATGACATCGGGGGACTTCACGTGCGAAAGGAC
AATGGTACTGACTGGATTCATGTCGCTCCAATTAGCGGATCACTCATTAT
CAACATTGGTGATGCATTGCAAATCATGAGCAATGGTCGATACAAAAGTA
TTGAGCATTGTGTGATTGCCAATGGAAGCCAGA
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