CK739889

Overview
NameCK739889
Unique NameCK739889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.717e-19
Identity = 56/170 (32.94%), Postives = 90/170 (52.94%), Query Frame = 2
Query:   23 VRYGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGSQ 532
            ++Y S+   +   A  W+D LS     +   +   P VC + MLEY +    L + + ++L + L +   + ++E        +  + +P CP P  T G  +H+D S  TILL D+ GGL V  D    WI V P   +LI N+GD LQ++SN ++ S+EH ++ANG +
Sbjct:  129 LKYHSNADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSP-NHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGY--WIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGE 295          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.341e-19
Identity = 61/183 (33.33%), Postives = 85/183 (46.45%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEML---------------EYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGSQ 532
            Y SSFV      L WK+ LS  +  EE+  +      KD +                EY  +   L  ++M++L   L V+R    +E          LNYYP C  PEL +G G H D ++ TIL QD +GGL V  DN   W  + P   + ++NIGD    ++NGRYKS  H  + N  +
Sbjct:  134 YASSFVGRFSSKLPWKETLSFKFSPEEKIHS---QTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVER-RYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDN--KWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSER 310          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.845e-18
Identity = 56/174 (32.18%), Postives = 92/174 (52.87%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKD-FLSLFYVSEEETSAFWPPVCKD---EMLEYMRSSEVLIKRLMDVLVKGLNVK--RIDEI---REPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YGS         LEW+D F    +  ++   + WP    D      EY +    L  +++ VL  GL ++  R+++     E +LL   ++ +NYYP CP PEL +GV  H+D+S  T +L + + GL +  +    W+    +  S+I++IGD ++I+SNG+YKSI H  + N
Sbjct:  129 YGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLL---QMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEG--QWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVN 297          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.845e-18
Identity = 60/179 (33.52%), Postives = 83/179 (46.37%), Query Frame = 2
Query:   20 NVRYGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEM-----------LEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            +V Y SSF       L WK+ LS  +  +   S        D +            EY  +   L  ++M++L   L VKR D  RE        + LNYYP C  P+LT+G G H D ++ TIL QD + GL V  +N   W  + P   + ++NIGD    +SN RYKS  H  + N
Sbjct:  133 SVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKR-DYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVEN--QWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVN 308          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.410e-18
Identity = 57/180 (31.67%), Postives = 90/180 (50.00%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFL-SLFYVSEEETSAFWPPVCKDEML---EYMRSSEVLIKRLMDVLVKGL-NVKRIDEIREPMLLGSRR----------VNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YGS    +     EW+D+L  L +       A WP    D +    ++ R +  L   L+ +L  GL    R D + + +   + R          + +NYYP CP PEL VGV  H+D+S  + +L + + GL V   +G  W+      G++I+++GDAL+I+SNGRY S+ H  + N
Sbjct:  138 YGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVL--HGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVN 315          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.410e-18
Identity = 55/171 (32.16%), Postives = 91/171 (53.22%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFL-SLFYVSEEETSAFWP---PVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSR--RVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YG+     +     W D L  + +        FWP   P+ ++   EY  +   ++ +L + L  G+ +++  E+++          + +NYYP CP P+L +GV  H+D+S  TIL+ +++ GL V KD+   W  V  I  +LII+IGD ++IMSNG+YKS+ H    N
Sbjct:  117 YGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEK-HELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVHKDD--HWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVN 284          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.368e-18
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFLSLFYVSEEETSAFWP------PVCKDEMLEYMRSSEV--LIKRLMDVLVKGLNVKRIDEIREPM--LLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQ-DDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIANGSQ 532
            +G +FV   ++ L+W D   LF+ + +      P      P+   + LE M SSEV  + K L+  + + L +K  +E+ +    +   + + +NYYP CP P+  +G+  HSD    T+L+Q +D+ GL ++KD    W+ V P+  + I+NIGD L+I++NG Y+SIEH  + N  +
Sbjct:  127 FGQAFVVSEDQKLDWAD---LFFHTVQPVELRKPHLFPKLPLPFRDTLE-MYSSEVQSVAKILIAKMARALEIKP-EELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDG--KWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEK 298          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.368e-18
Identity = 54/174 (31.03%), Postives = 93/174 (53.45%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKD-FLSLFYVSEEETSAFWPPVCKDEM---LEYMRSSEVLIKRLMDVLVKGLNVK--RIDEI---REPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YGS    +    LEW+D F    Y   +   + WP    D +    EY +    L  +++ VL  GL ++  R+++     E +++   ++ +N+YP CP PEL +G   H+D+S  T +L + + GL +  ++   W+    +  S+I++IGD L+I+SNG+YKSI H  + N
Sbjct:  131 YGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIV---QMKINFYPKCPQPELALGWEAHTDVSALTFILHNMVPGLQLFYED--KWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVN 299          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.011e-18
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFL-SLFYVSEEETSAFWP---PVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRV----NLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YG+S    VE    W D L    +        +WP   P  ++   EY +    ++ R+   L  GL ++  + I      G   +     +NYYP CP P+L +GV  H+D+S  TIL+ +++ GL V KD    W  V  I  +LI++IGD ++I+SNG+YKS+ H    N
Sbjct:  128 YGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAA---GGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFKDG--HWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVN 295          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.562e-17
Identity = 48/134 (35.82%), Postives = 80/134 (59.70%), Query Frame = 2
Query:  137 CKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRV-----NLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            C+  M E+ R  E L +RL+D+L + L +++   ++     GS  +      ++ YP CP P+L  G+  H+D     +L QDD + GL + KD   +WI V P+  S+++NIGD L++++NG+YKS+ H V+A
Sbjct:  112 CRATMKEFARELEKLAERLLDLLCEDLGLEK-GYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDR--EWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVA 242          
The following BLAST results are available for this feature:
BLAST of CK739889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
GSL_ARATH3.717e-1932.94Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
GAOX3_ARATH6.341e-1933.33Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
LDOX_PETHY1.845e-1832.18Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
GAOX1_ARATH1.845e-1833.52Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
LDOX_MAIZE2.410e-1831.67Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FLS_PETCR2.410e-1832.16Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
SRG1_ARATH5.368e-1832.96Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
LDOX_PERFR5.368e-1831.03Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
FLS_PETHY7.011e-1832.95Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
ACCO2_DORSP1.562e-1735.821-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6281 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739889 ID=CK739889; Name=CK739889; organism=Citrus sinensis; type=EST; length=533bp
GGAGAATTCACCAATAAATAATGTCAGGTACGGCTCAAGCTTTGTTCCCC
ATGTGGAAAGGGCTCTCGAGTGGAAAGACTTTCTCAGCCTGTTTTATGTT
TCTGAGGAAGAAACTTCTGCTTTTTGGCCTCCTGTTTGCAAGGATGAAAT
GTTGGAGTACATGAGGAGTTCTGAAGTTCTCATCAAACGTTTAATGGATG
TGCTAGTAAAGGGGCTAAACGTGAAACGAATTGATGAAATAAGAGAACCT
ATGTTGTTGGGCTCAAGAAGAGTTAACCTCAACTATTATCCTATGTGTCC
CAATCCTGAACTCACAGTTGGCGTAGGCCGTCATTCAGATATTTCAACAT
TCACTATCCTCCTCCAAGATGACATCGGGGGACTTCACGTGCGAAAGGAC
AATGGTACTGACTGGATTCATGTCGCTCCAATTAGCGGATCACTCATTAT
CAACATTGGTGATGCATTGCAAATCATGAGCAATGGTCGATACAAAAGTA
TTGAGCATTGTGTGATTGCCAATGGAAGCCAGA
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