CK739889

Overview
NameCK739889
Unique NameCK739889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.040e-17
Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = 2
Query:  149 MLEYMRSSEVLIKRLMDVLVKGLNVKR---IDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            M  +    E L +RL+D+L + L +++       R P    +    ++ YP CP P+L  G+  H+D     +L QDD +GGL + KD   +W+ V P+  S+++N+GD L++++NGRYKS+ H V+A
Sbjct:  119 MKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDG--EWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVA 244          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.040e-17
Identity = 48/134 (35.82%), Postives = 80/134 (59.70%), Query Frame = 2
Query:  137 CKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRV-----NLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            C+  M E+    E L +RL+D+L + L +++   +++    GS  +      ++ YP CP PEL  G+  H+D     +L QDD + GL + KD   +WI V P+  S+++NIGD L++++NG+YKS+ H V+A
Sbjct:  112 CRSTMKEFALELENLAERLLDLLCEDLGLEK-GYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--EWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVA 242          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.664e-17
Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 2
Query:  140 KDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVN----LNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            K  M E+    E L + ++D+L + L +++     + +  GS+  N    ++ YP CP PEL  G+  H+D     +L QDD + GLHV KD    W+ V P+  S++IN+GD L++++NG+YKS+ H VIA
Sbjct:  112 KKVMKEFADELEKLAEEVLDLLCENLGLEK--GYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDG--KWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIA 239          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.664e-17
Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = 2
Query:  149 MLEYMRSSEVLIKRLMDVLVKGLNVKR---IDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            M  +    E L +RL+D+L + L +++       R P    +    ++ YP CP P+L  G+  H+D     +L QDD +GGL + KD   +W+ V P+  S+++N+GD L++++NGRYKS+ H V+A
Sbjct:  119 MKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDG--EWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVA 244          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.664e-17
Identity = 58/172 (33.72%), Postives = 95/172 (55.23%), Query Frame = 2
Query:   35 SSFVPHVERALEWKDFLSLFYVSEEETSAFWP-PVCKDE----MLEYMRSSEVLIKRLMDVLVKGLNV-----KRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVI 517
            S  + ++ER +E  D+ S FY+     S  +  P   DE    M ++ +  E L + L+D+L + L +     K++    +    G++  N   YP CP PE+  G+  H+D     +L QDD + GL + KD   DWI V P++ S++IN+GD L++++NGRYKS+ H V+
Sbjct:   74 SKGLENLEREVEDVDWESTFYLRHLPQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSN---YPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDG--DWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVV 240          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 2.664e-17
Identity = 44/129 (34.11%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  149 MLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRR----VNLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            M ++    E L + L+D+L + L +++     + +  GS+R      ++ YP CPNP+L  G+  H+D     +L QDD + GL + KD   +W+ V P+  S+++N+GD L++++NG+YKS+EH V++
Sbjct:  114 MKDFAGKIEKLSEELLDLLCENLGLEK--GYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--EWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLS 238          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.544e-17
Identity = 57/185 (30.81%), Postives = 83/185 (44.86%), Query Frame = 2
Query:    2 ENSPINNVRYGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEM-----------LEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            +  P  +  Y SSF       L WK+ LS  + ++   S        D +            +Y  +   L  ++M++L   L V R D  R         + LN+YP C  P+LT+G G H D S+ TIL QD + GL V  DN   W  + P   + ++NIGD    +SNG +KS  H  + N
Sbjct:  125 QRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNR-DYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDN--QWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVN 306          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.544e-17
Identity = 60/180 (33.33%), Postives = 89/180 (49.44%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFL-SLFYVSEEETSAFWPP------VCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRI--------DEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YG+     VE    W D L    +        FWP          +E  +YMR    ++ +L   L  GL V+          D+I E ML       +NYYP CP P+L +GV  H+D+S  T+L+ +++ GL V KD+   WI    I  +L+I+IGD ++I+SNG+YK++ H    N
Sbjct:  115 YGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMRE---VVDKLFTYLSLGLGVEGGVLKEAAGGDDI-EYML------KINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVN 282          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.544e-17
Identity = 50/140 (35.71%), Postives = 82/140 (58.57%), Query Frame = 2
Query:  137 CKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRV-----NLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA--NGSQ 532
            C   M E+    E L +RL+D+L + L +++   ++     GS  +      ++ YP CP PEL  G+  H+D     +L QDD + GL + KD   +WI V P+  S+++NIGD L++++NG+YKS+ H V+A  NG++
Sbjct:  106 CGSTMKEFALGLEKLAERLLDLLCENLGLEK-GYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDE--EWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNR 242          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.935e-17
Identity = 50/139 (35.97%), Postives = 80/139 (57.55%), Query Frame = 2
Query:  122 FWP---PVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRR--VNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            FWP   P  ++   EY +    ++++L  +L  GL ++   E+++     +    + +NYYP CP P+L +GV  H+D+ST TIL+ +D+ GL   KD    W  V  I  +L+I+IGD ++IMSNG+Y S+ H    N
Sbjct:  149 FWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEG-QELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKDG--RWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVN 284          
The following BLAST results are available for this feature:
BLAST of CK739889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
ACCO1_ORYSI2.040e-1735.161-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_DORSP2.040e-1735.821-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO3_CUCME2.664e-1737.121-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO1_ORYSJ2.664e-1735.161-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_BRAJU2.664e-1733.721-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_ARATH2.664e-1734.111-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
GAOX2_ARATH4.544e-1730.81Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FLS_CITUN4.544e-1733.33Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
ACCO_DENCR4.544e-1735.711-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
FLS_MALDO5.935e-1735.97Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6281 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739889 ID=CK739889; Name=CK739889; organism=Citrus sinensis; type=EST; length=533bp
GGAGAATTCACCAATAAATAATGTCAGGTACGGCTCAAGCTTTGTTCCCC
ATGTGGAAAGGGCTCTCGAGTGGAAAGACTTTCTCAGCCTGTTTTATGTT
TCTGAGGAAGAAACTTCTGCTTTTTGGCCTCCTGTTTGCAAGGATGAAAT
GTTGGAGTACATGAGGAGTTCTGAAGTTCTCATCAAACGTTTAATGGATG
TGCTAGTAAAGGGGCTAAACGTGAAACGAATTGATGAAATAAGAGAACCT
ATGTTGTTGGGCTCAAGAAGAGTTAACCTCAACTATTATCCTATGTGTCC
CAATCCTGAACTCACAGTTGGCGTAGGCCGTCATTCAGATATTTCAACAT
TCACTATCCTCCTCCAAGATGACATCGGGGGACTTCACGTGCGAAAGGAC
AATGGTACTGACTGGATTCATGTCGCTCCAATTAGCGGATCACTCATTAT
CAACATTGGTGATGCATTGCAAATCATGAGCAATGGTCGATACAAAAGTA
TTGAGCATTGTGTGATTGCCAATGGAAGCCAGA
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