CK739889

Overview
NameCK739889
Unique NameCK739889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.935e-17
Identity = 48/134 (35.82%), Postives = 79/134 (58.96%), Query Frame = 2
Query:  122 FWP---PVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPM--LLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEH 508
            FWP   P  ++   EY    + L + L+ +L  GL +KR D ++E +   +    + +NYYP CP P+L +GV  H+D+S  T+L+ +++ GL V KD+   W     I  ++I++IGD +  +SNGRYK++ H
Sbjct:  147 FWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKR-DALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFKDD--HWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLH 277          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.012e-16
Identity = 60/186 (32.26%), Postives = 92/186 (49.46%), Query Frame = 2
Query:    8 SPINNVRYGSSFVPHVERALEWKDFLSLFYVS-EEETSAFWPP----VCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRID-EIREPMLLGSRR------VNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVR--KDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            SP  +  YG   +      L W +  S+   S     +  WP      C + M EY ++ + L  RL+ +L+  L +   D     P   GS        + LN YP+CP+P L +G+  H+D S  TIL Q +I GL +   ++ G+ WI V PI GSL++ +GD   I+SNG+++S  H  + N
Sbjct:  107 SPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFC-NVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVN 291          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.012e-16
Identity = 49/160 (30.63%), Postives = 89/160 (55.62%), Query Frame = 2
Query:   65 LEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKR-------IDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            ++W+D   +F + ++      PP  ++ M EY      L +++M+V+ + L  ++         + + P   G++   +++YP CP  +L  G+  H+D     +L QDD +GGL + KD    WI V P++ +++IN GD ++++SNGRYKS  H V+A
Sbjct:   87 VDWED---VFVLQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTK---VSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGR--WIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLA 238          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.322e-16
Identity = 52/161 (32.30%), Postives = 90/161 (55.90%), Query Frame = 2
Query:   65 LEWKDFLSLFYVSEEETSAFWPPVCKDE----MLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVN----LNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            L+W+    L ++     S    P  ++E    M E+    E L ++L+D+L + L +++     + +  GS+  N    ++ YP CP P+L  G+  HSD     +L QDD + GL + KD   +W+ V P+  S++IN+GD +++++NG+YKS+ H VIA
Sbjct:   84 LDWESTFFLRHLPSSNISEI--PDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEK--GYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDG--EWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIA 238          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.727e-16
Identity = 53/170 (31.18%), Postives = 90/170 (52.94%), Query Frame = 2
Query:   29 YGSSFVPHVERALEWKDFLSLFYVS-EEETSAFWPPV---CKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQ-DDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            YG +FV   E+ L+W D   L     +E    FWP      ++ M +Y    + +   L  ++ K L ++  + + +P+     R +    P   +    +G+  HSD +  T+L+Q +++ GLH++KD    W+ + PI G+ ++NIGD ++IMSNG YKSIEH  + N
Sbjct:  125 YGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLES-EILTKPLRTVFNRED-ELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDE--KWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVIN 290          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.727e-16
Identity = 57/174 (32.76%), Postives = 81/174 (46.55%), Query Frame = 2
Query:    2 ENSPINNVRYGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIAN 523
            E     + R+G+     + R L W +   +      +   F        M ++   SE L   L +VL +    +     +E  +  +  + +N YP CP P    G+  H+D    TIL QD +GGL + KDN   WI V P   +LIINIGD  Q  SNG YKS+EH V+ N
Sbjct:  109 EKFSAGSYRWGTPSATSI-RQLSWSEAFHVPMTDISDNKDF--TTLSSTMEKFASESEALAYMLAEVLAEKSG-QNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNR--WIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTN 276          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.727e-16
Identity = 47/132 (35.61%), Postives = 78/132 (59.09%), Query Frame = 2
Query:  140 KDEMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRR----VNLNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            ++ M E+    E L ++L+D+L + L +++     +    G+        ++ YP CPNPEL  G+  H+D     +L QDD + GL + KD    WI V P+  S++IN+GD L++++NG+Y+S+EH VIA
Sbjct:  111 RNVMKEFALKLEKLAEQLLDLLCENLGLEK--GYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDG--QWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIA 238          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.727e-16
Identity = 55/161 (34.16%), Postives = 87/161 (54.04%), Query Frame = 2
Query:   65 LEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSS----EVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVN----LNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            L+W+    L ++     S    P   DE  E MR      E L + L+D+L + L +++     +    GS+  N    ++ YP CP P+L  G+  H+D     +L QDD + GL + KD+   WI V P+  S++IN+GD L++++NG+YKS+ H VIA
Sbjct:   84 LDWESTFFLRHLPVSNISEV--PDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEK--GYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIA 238          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.946e-16
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 2
Query:  149 MLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVN----LNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            M E+    E L + L+D+L + L +++     +    GS+  N    ++ YP CP PEL  G+  H+D     +L QDD + GL + KD+   WI V P+  S++IN+GD L++++NG+YKS+ H VIA
Sbjct:  114 MKEFALKLEELAEELLDLLCENLGLEK--GYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDD--QWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIA 238          
BLAST of CK739889 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.847e-16
Identity = 52/160 (32.50%), Postives = 89/160 (55.62%), Query Frame = 2
Query:   65 LEWKDFLSLFYVSEEETSAFWPPVCKD---EMLEYMRSSEVLIKRLMDVLVKGLNVKRIDEIREPMLLGSRRVN----LNYYPMCPNPELTVGVGRHSDISTFTILLQDD-IGGLHVRKDNGTDWIHVAPISGSLIINIGDALQIMSNGRYKSIEHCVIA 520
            L+W+    L ++     S   P + +D    M E+    E L ++L+D+L + L +++     +    GS+  N    ++ YP CP P+L  G+  H+D     +L QDD + GL + KD   +W+ V P+  S++IN+GD +++++NG+YKSI H VIA
Sbjct:   84 LDWESTFFLRHLPSSNISEI-PDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEK--GYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--EWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIA 238          
The following BLAST results are available for this feature:
BLAST of CK739889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FLS1_ARATH5.935e-1735.82Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
G3OX3_ARATH1.012e-1632.26Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
ACCO_MUSAC1.012e-1630.631-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO1_MALDO1.322e-1632.301-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
NCS1_COPJA1.727e-1631.18S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
G2OX8_ARATH1.727e-1632.76Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
ACCO_PRUMU1.727e-1635.611-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO4_PETHY1.727e-1634.161-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO_PEA2.946e-1637.211-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO2_MALDO3.847e-1632.501-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6281 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739889 ID=CK739889; Name=CK739889; organism=Citrus sinensis; type=EST; length=533bp
GGAGAATTCACCAATAAATAATGTCAGGTACGGCTCAAGCTTTGTTCCCC
ATGTGGAAAGGGCTCTCGAGTGGAAAGACTTTCTCAGCCTGTTTTATGTT
TCTGAGGAAGAAACTTCTGCTTTTTGGCCTCCTGTTTGCAAGGATGAAAT
GTTGGAGTACATGAGGAGTTCTGAAGTTCTCATCAAACGTTTAATGGATG
TGCTAGTAAAGGGGCTAAACGTGAAACGAATTGATGAAATAAGAGAACCT
ATGTTGTTGGGCTCAAGAAGAGTTAACCTCAACTATTATCCTATGTGTCC
CAATCCTGAACTCACAGTTGGCGTAGGCCGTCATTCAGATATTTCAACAT
TCACTATCCTCCTCCAAGATGACATCGGGGGACTTCACGTGCGAAAGGAC
AATGGTACTGACTGGATTCATGTCGCTCCAATTAGCGGATCACTCATTAT
CAACATTGGTGATGCATTGCAAATCATGAGCAATGGTCGATACAAAAGTA
TTGAGCATTGTGTGATTGCCAATGGAAGCCAGA
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