CK739916

Overview
NameCK739916
Unique NameCK739916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_HALWD (Adenosylhomocysteinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=achY PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19
Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 3
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM-----LGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADG 548
            P  AL+A MEG +V+ + +  +  D+FVTTTGN+D+I  +  + M + AI+ N GHFD EI++     L ++TY     +      D          + VLAEGRL+NL    A GHP+ VM  SF  Q +   EL + KS+  Y+  V+ +P  LD                 LT+ Q++Y+   + G
Sbjct:  252 PRRALEAHMEGYEVMPMNEAATRGDVFVTTTGNRDVITQEDFEVMSDGAILANAGHFDVEINLEELSELAIDTYEARDGVQAYELGD-------GRRLNVLAEGRLVNLAAPIALGHPAEVMDQSFGIQAVCVRELIENKSS--YDAGVHNVPDELDREVAEIKLKAEGVDIDSLTQTQSEYLDSWSHG 431          
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_METAC (Adenosylhomocysteinase OS=Methanosarcina acetivorans GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.665e-19
Identity = 54/127 (42.52%), Postives = 75/127 (59.06%), Query Frame = 3
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSG---IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVI 374
            PI AL+A M+G +V+ + D     +IFVTTTGN+DI+  +H K M + A++ N GHF+ EIDM  L +      +    +T R    E + G   I V+AEGRL+NL    GHP+ VM  SF NQ +
Sbjct:  236 PIRALEARMDGYRVMRMADAARLGEIFVTTTGNRDILTAEHFKVMPDGAVLANSGHFNVEIDMEALTS------LAKSVKTVRHNIKEYDIGDRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQAL 356          
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_THEAC (Adenosylhomocysteinase OS=Thermoplasma acidophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.811e-18
Identity = 54/182 (29.67%), Postives = 94/182 (51.65%), Query Frame = 3
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADG 548
            PI A +A+M+G QV  + + + DAD+ +T TG KD++  +     K N ++ N GHF+NE+ +  +E    ++   ++    R+   E  + + ++A+GRL+NL    GHP  +M  SF  Q +    L   K+  K E+KVY +P ++D                +L +EQ  Y++   +G
Sbjct:  232 PIKANEAIMDGFQVRRMNNAIRDADMVITATGMKDVVKYEDALVAKKNIVLANAGHFNNEVAVSEIEK-RSLEVNEVREFVKRYRL-ENGNTVDIIADGRLVNLAAGQGHPVEIMDLSFALQALTAEYL--VKNHDKLERKVYPVPADIDRYVAEIRLKQFGGELDQLNEEQIKYLNSWDEG 409          
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.068e-17
Identity = 60/186 (32.26%), Postives = 93/186 (50.00%), Query Frame = 3
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRIT--IKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADG 548
            PI AL+A M+G +V+ + D V +ADI +T TGN D++       MK+  ++ N GHF+ EI+   LE    + R T  +K   + ++ P+    I +LAEGRL+NL      GHP+ +M  SF  Q ++   L +EK     +  VY  P  +D                 LT++Q  Y+    +G
Sbjct:  239 PIRALEARMDGFRVMKVSDAVKEADILITATGNTDVVSESEFMNMKDGCVMANSGHFNVEINREALEE---LSRETGKVKEDIEVFIMPDGRK-IYLLAEGRLVNLASERGQGHPAEIMDMSFAMQALSARHLLQEKP----DPGVYRAPDEIDLMVARMKLDAMGIEIDELTEKQRLYLENWEEG 416          
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_HALSA (Adenosylhomocysteinase OS=Halobacterium salinarium GN=ahcY PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 58/186 (31.18%), Postives = 86/186 (46.24%), Query Frame = 3
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL--------ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLG--CATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYI 530
            P  AL+A MEG  V+ + +     D+F+TTTGNK++I   H ++M +  ++ N GHFD E+++  L        E   GV+   +               + VLAEGRL+NL      GHP  VM  SF  Q +   EL   +   +Y   V+ +P  LD                 LT +QA+Y+
Sbjct:  247 PRRALEAHMEGYDVMPMAEAAEVGDVFLTTTGNKNVITRAHFERMDDGVVLANAGHFDVEVNLDHLSELAVSEREAREGVREYEL----------ADGRRLNVLAEGRLVNLASPIGLGHPVGVMDQSFGVQAVCVRELVANRE--EYAAGVHNVPDELDIEIAEIKLAAEGVEYDALTDDQAEYM 420          
The following BLAST results are available for this feature:
BLAST of CK739916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_HALWD4.337e-1933.86Adenosylhomocysteinase OS=Haloquadratum walsbyi (s... [more]
SAHH_METAC5.665e-1942.52Adenosylhomocysteinase OS=Methanosarcina acetivora... [more]
SAHH_THEAC2.811e-1829.67Adenosylhomocysteinase OS=Thermoplasma acidophilum... [more]
SAHH_METTH1.068e-1732.26Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_HALSA1.444e-1431.18Adenosylhomocysteinase OS=Halobacterium salinarium... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6308 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739916 ID=CK739916; Name=CK739916; organism=Citrus sinensis; type=EST; length=575bp
ATCCAATTTGCGCTCTCCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACC
CTTGAGGACGTCGTCTCCGATGCTGACATCTTTGTTACCACCACCGGTAA
CAAGGACATCATCATGGTTGACCACATGAAGAAGATGAAGAACAATGCAA
TTGTTTGCAACATTGGTCACTTTGATAATGAAATTGATATGCTCGGTCTT
GAGACCTACCCGGGTGTTAAGCGCATTACCATCAAGCCCCAAACTGATAG
GTGGGTCTTCCCGGAGACCAACTCAGGCATCATCGTGTTGGCTGAGGGAC
GTCTCATGAACTTGGGATGTGCCACTGGACACCCCAGCTTTGTGATGTCC
TGCTCCTTCACCAACCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAA
GAGCACCGGCAAGTACGAGAAGAAGGTGTACGTTCTGCCCAAGAACCTCG
ATGAAAAGGGTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACC
AGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCC
TTACAAGCCTCTTCACTACAGGTAC
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