CK739919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_PROM9 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9312) GN=petC PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.305e-51 Identity = 88/145 (60.69%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWWA 436 L P A +F P G GGGT+AKD +GN + WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +IE+ + W+ETDFRT E PWWA Sbjct: 34 LYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_PROM2 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9215) GN=petC PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.305e-51 Identity = 89/145 (61.38%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWWA 436 L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +IE+ + W+ETDFRT E PWWA Sbjct: 34 LYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGGIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_PROM0 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9301) GN=petC PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.011e-51 Identity = 89/145 (61.38%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWWA 436 L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH +IE+ + W+ETDFRT E PWWA Sbjct: 34 LYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEVGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_PROMP (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=petC PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.144e-50 Identity = 85/145 (58.62%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWWA 436 L P A +F P G GGGT+AKD +GN + WL +H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++++ + W+ETDFRT E PWWA Sbjct: 34 LYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLASHQAGDRSLVQGLKGDPTYLIVNSEGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWWA 178
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_PROM5 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9515) GN=petC PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.494e-50 Identity = 85/145 (58.62%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWWA 436 L P A +F P G GGGT+AKD +GN + WL H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++++ + W+ETDFRT E PWWA Sbjct: 34 LYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLANHQAGDRSLVQGLKGDPTYLIVNSEGDIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWWA 178
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRIA_BIGNA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Bigelowiella natans GN=petC PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.069e-48 Identity = 86/143 (60.14%), Postives = 99/143 (69.23%), Query Frame = 2 Query: 11 YATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKD-KTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWWA 436 Y +F PP G GG A DA+GN + A W +H R L +G+KGDPTYL+V D TL SYG+NA+CTHLGCVVPW++A NKF CPCHGSQY G VVRGPAP L LAH +NGK + PWTETDFRTGE PWWA Sbjct: 110 YLYYFYPPQTGGGGGAVGALDALGNPVSAESWFKSHKKNARDLVQGIKGDPTYLIVNDDGSTLNSYGLNAICTHLGCVVPWDAASNKFKCPCHGSQYAPDGHVVRGPAPRPLQLAHVEDDNGKILLSPWTETDFRTGEKPWWA 252
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJA (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain JA-3-3Ab) GN=petC PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.509e-39 Identity = 74/137 (54.01%), Postives = 91/137 (66.42%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFR 412 L P +F PP G AG G A+DA+G I ++ L TH DR L +GLKGDPTY+V++ +A+YG+NAVCTHLGCVVPWN+ EN F CPCHGSQY G+V+RGPAP SL L A ++ F PW DFR Sbjct: 35 LYPVVKYFIPPSSGGAGEGVIAQDALGKPISVSELLATHAATDRVLAQGLKGDPTYIVIDNG-AVANYGLNAVCTHLGCVVPWNAGENLFKCPCHGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJB (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. GN=petC PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.923e-38 Identity = 73/137 (53.28%), Postives = 89/137 (64.96%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFR 412 L P +F PP G G G A+DA+G I ++ L TH DR L +GLKGDPTY+V++ +A+YG+NAVCTHLGCVVPWN EN F CPCHGSQY G+V+RGPAP SL L A ++ F PW DFR Sbjct: 35 LYPVVKYFIPPSAGGGGEGLIAQDALGKPISVSELLATHAATDRVLAQGLKGDPTYIVIDNG-AVANYGLNAVCTHLGCVVPWNVGENLFKCPCHGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRIA_SYNY3 (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=petC1 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.960e-36 Identity = 72/139 (51.80%), Postives = 87/139 (62.59%), Query Frame = 2 Query: 20 FFAPPG-LGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWW 433 FF PP G AGGG AKD +GN I A+ L PG R L GL GDPTYL+V++D +L S GI CTHLGC PWN + +F CPCHGS+Y+ G V RGPAPL L + + + + PWT+ D RTGE PWW Sbjct: 40 FFVPPAEKGGAGGGIIAKDVLGNPIPASQIL-AEAPGTRALVAGLAGDPTYLIVKEDGSLDSIGIVDSCTHLGCTFPWNGNDQEFQCPCHGSRYHPDGSVARGPAPLPLKIVQVAVVDDQIFISPWTDLDPRTGEKPWW 177
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_GLOVI (Cytochrome b6-f complex iron-sulfur subunit OS=Gloeobacter violaceus GN=petC PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.368e-34 Identity = 71/152 (46.71%), Postives = 88/152 (57.89%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLK---GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFR-----TGEAPWW 433 L P +F PP G G AKD G DI + L PG+ LT GL GD TY+V+ K +A++GINAVCTHLGCVVPW++ +F CPCHGS YN G + RGPAP LAL A + + K + PWTE DFR + P+W Sbjct: 33 LYPVVLYFLPPSTAGGGEGVAAKDKEGKDISVSKLLAAATPGEPVLTLGLDVNGGDATYIVINDQKEIANFGINAVCTHLGCVVPWDNGAKQFKCPCHGSVYNADGGLERGPAPQPLALVKATVSDDKVLIAPWTEQDFRCTDLWCNKDPYW 184 The following BLAST results are available for this feature:
BLAST of CK739919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739919 ID=CK739919; Name=CK739919; organism=Citrus sinensis; type=EST; length=627bpback to top |