CK739919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRIC_ANASP (Cytochrome b6-f complex iron-sulfur subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=petC3 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.107e-32 Identity = 69/145 (47.59%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 2 LVPYATFF-APPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWW 433 L P F AP AGG AKD +G I A+ L P R L GL G+PTYL+V++D TL G+ CTHLGC PWN + +F CPCHGS+Y G VVRGPAPL L + + + + PWTETD RTG+ PWW Sbjct: 34 LYPAGKFLIAPAEKTGAGGAILAKDILGKQIPASQIL-AEPPQTRALVAGLAGEPTYLIVKEDHTLDRIGLVDNCTHLGCTFPWNPLDQQFQCPCHGSRYAPDGSVVRGPAPLPLKIVQVAVIDNSILISPWTETDPRTGKKPWW 177
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRIB_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC2 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.553e-31 Identity = 70/145 (48.28%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWW 433 + P FF PP + A GG AKD IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L H +++ W ETD RTGE PWW Sbjct: 34 IYPATKFFMPPAESTDAEGGVLAKDKIGHPIPASQIL-VQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVHVQVKDDYIWISSWQETDPRTGEKPWW 177
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRIB_ANASP (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=petC2 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.903e-31 Identity = 69/145 (47.59%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 2 LVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGKGVFVPWTETDFRTGEAPWW 433 + P FF PP + A GG A+D IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L +++ PW ETD RTGE PWW Sbjct: 34 IYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQIL-AQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVQVQVKDDYIWISPWQETDPRTGEKPWW 177
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_CHLLT (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium limicola f.sp. thiosulfatophilum GN=petC PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 170 LVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIE 367 +VV K L + ++AVCTHLGC+V W A+N++ CPCHG++Y G ++ GP PL L A IE Sbjct: 109 IVVNKGGALTA--VSAVCTHLGCLVNWVDADNQYFCPCHGAKYKLTGEIISGPQPLPLKQYKARIE 172
BLAST of CK739919 vs. ExPASy Swiss-Prot
Match: UCRI_CHLTE (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium tepidum GN=petC PE=3 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 2 Query: 158 DPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNYQGRVVRGPAPLSLALAHANIENGK 376 D +VV +L + ++A+CTHLGC+V W+ A + CPCHG++Y G+++ GP PL L IE+GK Sbjct: 105 DDKVIVVNHGGSLTA--VSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQPLPLKQYKVKIEDGK 175 The following BLAST results are available for this feature:
BLAST of CK739919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739919 ID=CK739919; Name=CK739919; organism=Citrus sinensis; type=EST; length=627bpback to top |